PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00957g00236.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family FAR1
Protein Properties Length: 551aa    MW: 64389.1 Da    PI: 6.5095
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00957g00236.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1324.1e-10591153790
                      FAR1  37 kegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 
                               k g ++++k ++++++r r+++r++C+ak+ v ke      +w v  +++ HnHel 
  Peaxi162Scf00957g00236.1  59 KAGCPRPQKVAEKERQRDRKSSRCNCNAKMSVAKEIidgITHWIVVYFDNVHNHELL 115
                               66777888888889999****************998856789*************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.6E-759115IPR004330FAR1 DNA binding domain
PfamPF105511.0E-9265314IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    Send to blast
MKVINNTSND STVGVSRIHC PCGDNECYIH GETVGGVTET SNEEVRPENI GIGTTDLHKA  60
GCPRPQKVAE KERQRDRKSS RCNCNAKMSV AKEIIDGITH WIVVYFDNVH NHELLNDKEI  120
KYLPAYRNID YIDQKRISLL AKVGCPFSLI RRVLELEKSA DVGQLSFTEK DIRNFLQSES  180
STNIEYDALE LLKICKSLKD KDVDFQYDFT VDACQRLKNI IWAFGDFIRA YELFGDVVVF  240
DTTYRLNRYE MPLGVWVGVN NHYHFLWLRS SFLRLMNGKH PQTILTDQDL GLTEAIANEL  300
PLTKHAFCIW HITSKFSTWF SFVLGSSYLQ FKSEFHRLYE LGSIEEFEHQ WAELISEFDL  360
ESDRHIRLLY ANRWHRSQYK KPSWRRGNNG LKTLMPMEKH ASKVLSPFAF KLLQDEMILS  420
AEYGLFPIMM DHISHSIRVL TAHNYFTLPE KYLLARWRQE NSLVPTFTHM MNHDNQDIEF  480
QNLQSVVRNL THESMKTKGR LEYAKTKLER VMEIVQNLPE NEQVDEEQGR VSICHSIEDN  540
SRDEDYHIEN P
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016499085.10.0PREDICTED: protein FAR1-RELATED SEQUENCE 11-like
TrEMBLA0A1S4CD640.0A0A1S4CD64_TOBAC; protein FAR1-RELATED SEQUENCE 11-like
STRINGXP_009596355.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7183722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.11e-120FAR1-related sequence 10