PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00954g00114.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | FAR1 | ||||||||
Protein Properties | Length: 389aa MW: 44514.9 Da PI: 9.3431 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 80.3 | 3.4e-25 | 55 | 140 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 Y++YA++ GFsvr+ + +ks+++++i+ ++fvCske +r++++ + ++r+r +tr gCk l v+k+k+g+w+v +l++eHn Peaxi162Scf00954g00114.1 55 IYHDYAHRNGFSVRRGRITKSRKDKSIIGQEFVCSKERFRRKKNLE---SNRPRDVTREGCKVLLYVSKKKEGNWVVCRLVSEHN 136 7***************************************998777...999********************************* PP FAR1 87 Hela 90 Hela Peaxi162Scf00954g00114.1 137 HELA 140 **97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 1.5E-22 | 55 | 140 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 389 aa Download sequence Send to blast |
MENSNLDEQN IKGVEVRLEE SNMDGPEQAP YVGVENSREP YIGMDFQSLD DSFKIYHDYA 60 HRNGFSVRRG RITKSRKDKS IIGQEFVCSK ERFRRKKNLE SNRPRDVTRE GCKVLLYVSK 120 KKEGNWVVCR LVSEHNHELA SPNSQKFLRS KRKKSEAQKS LIDLLDSSGV RPSIIASVLI 180 NQAGGVDQLN LTDRWTRNAT EEKIDEHQNE TNILKPSVSW FNNIMMHSIG LPNELQGLKN 240 ITCLHIKELD ELPYEYEKDC VSGDQVSAPN IESNSFEHSQ NFTLLDPPRA INKGRPRSLR 300 MKGSLESTRK TKKDSSLKQK GQSRSTKLKN KETRLNSNAE AEQRSTVTSV NEARAMSQQY 360 AESYQGYVEN TGYTYPSSFM HHNNGMNKC |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015167012.1 | 1e-95 | PREDICTED: protein FAR1-RELATED SEQUENCE 5-like | ||||
TrEMBL | A0A3Q7EE03 | 4e-79 | A0A3Q7EE03_SOLLC; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA645 | 8 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 6e-32 | FAR1-related sequence 5 |