 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Peaxi162Scf00939g00211.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
|
| Family |
TCP |
| Protein Properties |
Length: 231aa MW: 25346.9 Da PI: 4.2744 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peaxi162Scf00939g00211.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 96.1 | 6.6e-30 | 168 | 229 | 2 | 63 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikelt 63
g+kdrhsk+ T +g+RdRRvRls++ a++f+dLqd+LG+d++sk++eWLl++a p+i el
Peaxi162Scf00939g00211.1 168 SGGKDRHSKVWTLKGLRDRRVRLSVNAAIQFYDLQDKLGYDQPSKAVEWLLKAAAPSISELL 229
689********************************************************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 231 aa
Download sequence Send
to blast |
MSSLDTTMED EEYFFDSDTD AIIFGISDHS GWGGDSMISD PNIVSSPSTS IDDYQQQISM 60
AVGGGGDDDL MIASSAGASS SRLNNNNKQS EIRIFNVDFR ALSGVAVLSS QSCQSPQNNF 120
PQFCIQGDEQ NQDEEDSVRE IQNSTSVYDV TKLCGWPSSR IVRVSRASGG KDRHSKVWTL 180
KGLRDRRVRL SVNAAIQFYD LQDKLGYDQP SKAVEWLLKA AAPSISELLP L
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zkt_A | 6e-21 | 175 | 228 | 1 | 54 | Putative transcription factor PCF6 |
| 5zkt_B | 6e-21 | 175 | 228 | 1 | 54 | Putative transcription factor PCF6 |
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT4G18390.2 | 7e-36 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 |
