PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00932g00044.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family HD-ZIP
Protein Properties Length: 736aa    MW: 80781 Da    PI: 5.4349
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00932g00044.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.14.7e-2176132157
                               TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
                  Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                               r++ +++t++q++eLe++F+++++p+ ++r+eL+++lgL+  q+k+WFqN+R+++k+
  Peaxi162Scf00932g00044.1  76 RKRYHRHTQHQIQELEAYFKECPHPDDKQRKELSRELGLEPLQIKFWFQNKRTQMKN 132
                               789999************************************************995 PP
2START165.83.1e-522674721206
                               HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S.... CS
                     START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetla.... 77 
                               ela +a++e+v++a+ +ep+W+ s     + +n++e+ ++f+++ +      +  g+ ++++ +       ++  W+ ++a    
  Peaxi162Scf00932g00044.1 267 ELAVAAMEEFVQMAQMAEPLWFPSIergtTLLNEEEYFRIFPRGIG-----PKPAGFKTEASRE-----TAVN-HWSSMFAgvvs 340
                               57899********************888888899999999977555.....3333333333332.....2234.56666666666 PP

                               EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEE CS
                     START  78 kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgilie 155
                               +a+t++v+s+g      galq++ ae+q++sp vp R+ +f+Ry++   +g+w++vdvS+d+ +  p    v R++++pSg+li+
  Peaxi162Scf00932g00044.1 341 RASTIDVLSTGvagnfnGALQVILAEFQVPSPQVPtRECYFARYCKHRADGTWAVVDVSLDHLRATP----VDRCRRRPSGCLIQ 421
                               *****************************************************************99....7************* PP

                               EECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                     START 156 pksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                               +++ng+skvtwvehv++++  +h ++++lv+sgla+gak+w+atl+rqce+
  Peaxi162Scf00932g00044.1 422 EMPNGYSKVTWVEHVEVDDGAVHDIYKPLVSSGLAFGAKRWLATLDRQCER 472
                               *************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.9E-2257131IPR009057Homeodomain-like
SuperFamilySSF466891.38E-1968133IPR009057Homeodomain-like
PROSITE profilePS5007117.49173133IPR001356Homeobox domain
SMARTSM003891.8E-2075137IPR001356Homeobox domain
CDDcd000862.14E-2075134No hitNo description
PfamPF000461.3E-1876131IPR001356Homeobox domain
PROSITE patternPS000270108131IPR017970Homeobox, conserved site
PROSITE profilePS5084837.37258475IPR002913START domain
SuperFamilySSF559611.71E-28260474No hitNo description
CDDcd088755.83E-111262471No hitNo description
SMARTSM002348.4E-47267472IPR002913START domain
PfamPF018522.4E-43268472IPR002913START domain
Gene3DG3DSA:3.30.530.201.5E-6348467IPR023393START-like domain
SuperFamilySSF559611.92E-24502728No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 736 aa     Download sequence    Send to blast
MASLVVNDGS DNGFADSGIP LVQSSSMMDI PLHSLDMISN TSGSEMQRLR EDFGNKSGSE  60
GNSVDDEQAV NKSLKRKRYH RHTQHQIQEL EAYFKECPHP DDKQRKELSR ELGLEPLQIK  120
FWFQNKRTQM KNQHERHENS HLRAENEKLR AENLRFREAL GNASCINCGT GQPPVGEMSY  180
DEHQLRLENT RLREEIERIS NIAAKYVGKP FLNHNGYSQS ITRPLDIGIP AFSAQQSVDG  240
EAYGDHGEDV ISSIIGPSEA EKPFIIELAV AAMEEFVQMA QMAEPLWFPS IERGTTLLNE  300
EEYFRIFPRG IGPKPAGFKT EASRETAVNH WSSMFAGVVS RASTIDVLST GVAGNFNGAL  360
QVILAEFQVP SPQVPTRECY FARYCKHRAD GTWAVVDVSL DHLRATPVDR CRRRPSGCLI  420
QEMPNGYSKV TWVEHVEVDD GAVHDIYKPL VSSGLAFGAK RWLATLDRQC ERLASAMATN  480
IPNNDISNMG NYNASMLANQ DSRKSMLKLA ERMVISFCSG VSATTANQWT TLSGSGSDDV  540
RVMTRKSVDD PGRPPGIVLS AATSFWLPIS PKTVFDFLRD ENTRNEWDIL SNGGVVQEMA  600
HIANGRETGN CVSLLRVDSS NSNQSNMLIL QESITDPTGS FVIYAPVDIA AMNIVLGGGD  660
PDFVALLPSG FAILPDGPPG SGRAIGSGGS LLTVAFQILV DSVPTAKLSL GSVATVNNLI  720
SCTVERIKSA LLSETP
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019223745.10.0PREDICTED: homeobox-leucine zipper protein HDG2-like
SwissprotQ94C370.0HDG2_ARATH; Homeobox-leucine zipper protein HDG2
TrEMBLA0A314KYP40.0A0A314KYP4_NICAT; Homeobox-leucine zipper protein hdg2
STRINGXP_009766038.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9322491
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0homeodomain GLABROUS 2