 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Peaxi162Scf00871g00029.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
|
| Family |
Trihelix |
| Protein Properties |
Length: 232aa MW: 26818.1 Da PI: 9.8513 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peaxi162Scf00871g00029.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 51 | 3.9e-16 | 25 | 115 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcp 80
+W+++ + +L++a ++ +l+rg+l++++W++v++++ + ++ +r+ +qCk++++ l+k+yk +k+ + + + s++p
Peaxi162Scf00871g00029.1 25 CWSEEATSTLVDAWGKRYMELNRGNLRQKDWQQVADAVnalhgHTKKTQRTDVQCKNRIDTLKKKYKIEKAKIVESNGTLISSWP 109
7****************************************99999************************999998888899*** PP
trihelix 81 yfdqle 86
+f++l+
Peaxi162Scf00871g00029.1 110 FFNRLD 115
****97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MGEIIEYTMM NQTPPTRPMP FREDCWSEEA TSTLVDAWGK RYMELNRGNL RQKDWQQVAD 60
AVNALHGHTK KTQRTDVQCK NRIDTLKKKY KIEKAKIVES NGTLISSWPF FNRLDVLIGN 120
SVKHQYQVAK YTPPVMSLPP PVPMAVPMGV PLPYPRPIAT ATATPAIEKF GETYERVEVM 180
KQKQMVELEK KRMQLAKDLE VQRMHMFVQF AKDLEVQNIK QAKRSTSDDI YS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G05550.2 | 5e-42 | sequence-specific DNA binding transcription factors |
