PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00850g00416.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 376aa    MW: 42525.2 Da    PI: 9.1521
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00850g00416.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.3e-102893411055
                               HHHHHHHHHHHHHHHCTSCCC..........TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  10 rrRRdriNsafeeLrellPkas.......kapskKlsKaeiLekAveYIksLq 55 
                               r+RR+riN+++  L++l+P+ +        + s K++ +++Le+Av+Y+k Lq
  Peaxi162Scf00850g00416.1 289 RKRRERINERLRILQSLVPNGTkvcdvltETASIKVDISTMLEEAVQYVKFLQ 341
                               9*******************555*****9999999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.335279340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-12279356IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.4E-11284350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-9285346IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.16E-9288345No hitNo description
PfamPF000108.4E-8289341IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MYAFTVLVCS TPLLLRRELL CSPPQTSLFS SANHVFRQPC RANFKSILRI GLFRIQSLLS  60
LTKRPDYGFL KRLFRELFTR QGYEFDYVFD WTILKYQQAQ TSKPQHRVSF RCNKVNQLVV  120
PSTISTGNNG HYVAEVEDKI SSPSDQVAAS NVIEANHAIN FLNQEVSNDS MESGENMLET  180
AHHGKSLQLG REYEIQVLER SSQDRQDSPS ESSKKRSRLP VDIPKNKRSS KPPSIFCNLG  240
IFRSSFSCCS EDESNFSYDL NGLTSSSNSK GKSRASRGSA TDPQSLYARK RRERINERLR  300
ILQSLVPNGT KVCDVLTETA SIKVDISTML EEAVQYVKFL QLQIKLLSSD DLWMYSPIAY  360
NGMDLGLDLK LGAPNS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3sv0_A2e-1359122258321Casein kinase I-like
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019264160.11e-102PREDICTED: transcription factor bHLH84
TrEMBLA0A1J6JNX61e-100A0A1J6JNX6_NICAT; Transcription factor bhlh84
STRINGXP_009777466.15e-94(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.18e-35bHLH family protein