PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00848g00116.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

C2H2

Protein Properties

Length: 759aa MW: 83383.3 Da PI: 4.8728

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00848g00116.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.00031	61	82	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C+ F ++ n+krHir+H Peaxi162Scf00848g00116.1 61 KCEKCSLEFCSPINYKRHIRLH 82 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence Send to blast
MFGRKDYIPV GKLRSGALDA MKGDEGGHPD QFAQWLDSLN QQGADITELP FLKKSKVQMQ 60 KCEKCSLEFC SPINYKRHIR LHHRSVNFDK ESRKYRDLLG AFWDKLSVDE VKEVVSLQDI 120 SLKEIAGSSL VHALSTALGK PGFWNLPRVY VKAGSKLLEV IQAKPWPVTS QELFSILDDA 180 SEGTFLCAAT AESVQKYVFD GEAAKIGLDP MNLIACASFL FEQKLIKAWA ADKDAEALRR 240 QKSLFEEEEA AKKKQAGKLE KKKLKKLRQK EQKARVQLNE EEVNREVPAD SFKVPSPEVS 300 SLPAPSQELL NKQEGNLEVP ADSLEVPSPE VSSLPAPSQE LLNKQEGNLE VPADSSEFPS 360 PEVSSLPAPS RELLNEQEGN LEVPADSSEV PSPEVSSLPA PSRELSNEKE GNLEVPADSS 420 EVPSPEVSSL PAPPRELSNE KEGNLEVPAD SLEVPSPEVS SLPAPPRKLS NEKEGNLEVP 480 ADSLEVPSPE VSSLPAPPRK LSNENEGNLE VQFSSNEDMG VESKYDLCLQ YVDVVRVQND 540 ESQPVPVSVR RRLPYAQWQR FGQSGFHNNQ NHPALQGEPI QKHKDSGGPV NSNKIWTRKV 600 RVESDDASIP EVPKEAIDQQ QSSHELMIGS LSIPVRDCST QSAEARDDFE NALQGLEWSP 660 TALKAILRRR WNEALAGDHV ILTLSPDTES SGQADVPTSS SSEAAPVSDG KEHGIVSTAD 720 DQPAKSEVLN SSSSGNSVVK NRRKPGKGTR TKYIRKQKK

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence Send to blast

MFGRKDYIPV GKLRSGALDA MKGDEGGHPD QFAQWLDSLN QQGADITELP FLKKSKVQMQ  60
KCEKCSLEFC SPINYKRHIR LHHRSVNFDK ESRKYRDLLG AFWDKLSVDE VKEVVSLQDI  120
SLKEIAGSSL VHALSTALGK PGFWNLPRVY VKAGSKLLEV IQAKPWPVTS QELFSILDDA  180
SEGTFLCAAT AESVQKYVFD GEAAKIGLDP MNLIACASFL FEQKLIKAWA ADKDAEALRR  240
QKSLFEEEEA AKKKQAGKLE KKKLKKLRQK EQKARVQLNE EEVNREVPAD SFKVPSPEVS  300
SLPAPSQELL NKQEGNLEVP ADSLEVPSPE VSSLPAPSQE LLNKQEGNLE VPADSSEFPS  360
PEVSSLPAPS RELLNEQEGN LEVPADSSEV PSPEVSSLPA PSRELSNEKE GNLEVPADSS  420
EVPSPEVSSL PAPPRELSNE KEGNLEVPAD SLEVPSPEVS SLPAPPRKLS NEKEGNLEVP  480
ADSLEVPSPE VSSLPAPPRK LSNENEGNLE VQFSSNEDMG VESKYDLCLQ YVDVVRVQND  540
ESQPVPVSVR RRLPYAQWQR FGQSGFHNNQ NHPALQGEPI QKHKDSGGPV NSNKIWTRKV  600
RVESDDASIP EVPKEAIDQQ QSSHELMIGS LSIPVRDCST QSAEARDDFE NALQGLEWSP  660
TALKAILRRR WNEALAGDHV ILTLSPDTES SGQADVPTSS SSEAAPVSDG KEHGIVSTAD  720
DQPAKSEVLN SSSSGNSVVK NRRKPGKGTR TKYIRKQKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	259	266	EKKKLKKL
2	742	758	RKPGKGTRTKYIRKQKK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006363322.1	1e-175	PREDICTED: uncharacterized protein LOC102598349 isoform X1
TrEMBL	A0A1J6IYH1	1e-137	A0A1J6IYH1_NICAT; Uncharacterized protein
STRING	XP_009758251.1	1e-136	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3722	21	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	7e-68	C2H2-like zinc finger protein