PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00823g00016.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB_related
Protein Properties Length: 280aa    MW: 30922 Da    PI: 8.4781
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00823g00016.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.96.2e-154085247
                              SSS-HHHHHHHHHHHHHTTTT-HHHHH.HHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIa.rtmgkgRtlkqcksrwqky 47
                              +rWT++E+ l++++ k +G+g+W++I+ r+++  Rt+ q+ s+ qky
  Peaxi162Scf00823g00016.1 40 NRWTEDEHTLFLRGLKIHGKGNWAKISnRCLP-SRTPQQIASHAQKY 85
                              69*************************44566.*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129419.1543490IPR017930Myb domain
TIGRFAMsTIGR015572.2E-123788IPR006447Myb domain, plants
SuperFamilySSF466896.06E-153790IPR009057Homeodomain-like
SMARTSM007172.2E-113888IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.5E-123884IPR009057Homeodomain-like
PfamPF002492.1E-124085IPR001005SANT/Myb domain
CDDcd001671.46E-124186No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MGRNNMCSEK GKKIKLFGVT ISSTNTTNSA NYGRKIKKGN RWTEDEHTLF LRGLKIHGKG  60
NWAKISNRCL PSRTPQQIAS HAQKYFIRLA ETNDGRRRNK PSVFDVNLET TSPEEISEEN  120
NSNVSSEHSI VLFKDQEHGD NTVPLKNQEH DGVIVPLEIH ERDANIVPLE IQKHGQEHQE  180
TASAEVVIPI AAIPTATSQY PSSLIPSYSM VQVSAVGGTR AVLPVTWVQM YNGINYGTLV  240
QQTLHGFCPS MGVLPWLGIV AGVIFNFNAN ASMVGVFVNS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016510762.12e-49PREDICTED: transcription factor MYB1R1-like
TrEMBLA0A1S4DBF24e-48A0A1S4DBF2_TOBAC; transcription factor MYB1R1-like
STRINGXP_009631002.11e-48(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74541230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.19e-20MYB family protein