PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00813g00118.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bHLH | ||||||||
Protein Properties | Length: 231aa MW: 26953.3 Da PI: 9.9787 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 18.7 | 3.1e-06 | 77 | 123 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h + Er RR++ +++f L +llP +K +K +i+ A + I +Lq Peaxi162Scf00813g00118.1 77 KHMIKERIRREKQKESFLALHKLLPMG-----TKGEKNAIVLTAARRIEELQ 123 68999********************97.....79999999999999999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 7.07E-10 | 69 | 137 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.50E-6 | 71 | 124 | No hit | No description |
PROSITE profile | PS50888 | 10.861 | 73 | 122 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.5E-6 | 77 | 141 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MEEFFQVQWF EDEAFSVNKS CFMSYKNQPF EGIGGSSKNG NVSMNHRNMN KRMMEFLKKS 60 WSPQIGEVKM ERERVHKHMI KERIRREKQK ESFLALHKLL PMGTKGEKNA IVLTAARRIE 120 ELQKYKEILK RRNDELQRIL AESEKGKFDK AKIKVKVNYP ISGIDSMLQV LECLKNSGSK 180 VNAIQSNFSQ QEFTTMLEIE TKVSVLLFLP HGSRIVCMPT FYNGDFLENC V |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009614938.1 | 1e-101 | PREDICTED: transcription factor bHLH92 | ||||
TrEMBL | A0A1J6I2W2 | 3e-99 | A0A1J6I2W2_NICAT; Transcription factor bhlh92 | ||||
STRING | XP_009614938.1 | 1e-100 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12463 | 18 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 1e-40 | bHLH family protein |