|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Peaxi162Scf00769g00012.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
|
Family |
FAR1 |
Protein Properties |
Length: 409aa MW: 46551.4 Da PI: 8.4377 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00769g00012.1 | genome | SGN | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 67.9 | 2.6e-21 | 53 | 128 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85
+fYn YA++vGF++r+ + ++s+ +g++++r+fvCskeg++++ +rtgC a ++v++ ++gkw+++++++eH
Peaxi162Scf00769g00012.1 53 EFYNLYATKVGFRIRIGQLYRSRVDGSVVSRRFVCSKEGFQTT--------------SRTGCPAFIRVRRVDSGKWVLANIKKEH 123
6***************************************976..............589************************* PP
FAR1 86 nHela 90
nHel
Peaxi162Scf00769g00012.1 124 NHELE 128
***96 PP
|
2 | FAR1 | 67.6 | 3.1e-21 | 201 | 276 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85
+fY++YA ++GF+vr+ + +sk++g+it+r+fvCskeg++++ +r+gC a ++++++++g+w v+++++eH
Peaxi162Scf00769g00012.1 201 EFYHTYAANTGFRVRIGQLFRSKNDGSITSRRFVCSKEGHQHP--------------SRVGCGAFMRIQRQETGRWLVDRCQNEH 271
6**************************************9998..............4899************************ PP
FAR1 86 nHela 90
nHel
Peaxi162Scf00769g00012.1 272 NHELD 276
***97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 409 aa
Download sequence Send
to blast |
MSREELGNTM TVRANPAGLA IVKTNDLRDD DEKESRLEPN VGLEFDSAED AQEFYNLYAT 60 KVGFRIRIGQ LYRSRVDGSV VSRRFVCSKE GFQTTSRTGC PAFIRVRRVD SGKWVLANIK 120 KEHNHELEHP GEIYPSRIQR KIIPSPKSSV VSTRTGLRSI DEDNPSGIID LKRLKREKVD 180 GEPTGEPYKG LEFISAGEAY EFYHTYAANT GFRVRIGQLF RSKNDGSITS RRFVCSKEGH 240 QHPSRVGCGA FMRIQRQETG RWLVDRCQNE HNHELDPASD ASGGVSVASK GFKEEASILH 300 SKDPMEDQSR KLYTITMFKV FQKELLECYN YVGIKINIEG AISRYLDAKY GILRDVDSGG 360 TSQDYNALML WSLREEARNY IEAGTASLER YKLAFEIMQE GRRNLCWQN
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | HG975522 | 2e-69 | HG975522.1 Solanum lycopersicum chromosome ch10, complete genome. |