PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00753g00435.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 274aa    MW: 30942 Da    PI: 8.3259
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00753g00435.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.52.1e-07164190430
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                               +h+ +Er RR++iN+++  L+el+P +
  Peaxi162Scf00753g00435.1 164 SHSLAERLRREKINEKMRCLQELIPGC 190
                               8************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.5E-15158227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.84E-8158214No hitNo description
PROSITE profilePS5088814.24160210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-14160223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.3E-5164190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-5166216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MKIQIGLKHF QKYLEVENLS SNVQLGNLAL LNEGFSDHHQ RIHHIDDHDR MLPVMAFHNE  60
MNLSSTISNP QNVYDPVAAA VNAAQFFTLG GPTYGTNSIP ESDSLMNNNV STPAPPVSIG  120
KAYGNYNCGV RKRKRQRKRN NDREADKPRE VVHVRAKRGQ ATDSHSLAER LRREKINEKM  180
RCLQELIPGC YKTMGMAVML DVINNYVRSL QNQIDFLSMK LSAASLSYDF NSSEMEAMDS  240
MQGTNNFCEA QGMRKIADEG YGGFPHFQTS NWPL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131136KRKRQR
2132138RKRQRKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009797953.11e-142PREDICTED: transcription factor bHLH75-like isoform X2
TrEMBLA0A1U7Y4911e-141A0A1U7Y491_NICSY; transcription factor bHLH75-like isoform X2
STRINGXP_009797952.11e-140(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA90691724
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.13e-54bHLH family protein