PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00710g00410.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family GeBP
Protein Properties Length: 291aa    MW: 32390.2 Da    PI: 9.753
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00710g00410.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57339.71.3e-121401924197
                    DUF573  41 vkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                                kks  ++vsk+ql +Kir+LKkK++++v+k    k+++fs++h+qk+++ls+kiWg
  Peaxi162Scf00710g00410.1 140 QKKSDAVDVSKTQLQDKIRKLKKKYENQVAK----KKKAFSTPHQQKTYDLSQKIWG 192
                               4677789************************....8899*****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.4E-12128192IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MADNPQDPSE KASSESEQSP KKSKKTPPQD SSSSKEESES ESESEKSKKT PPQDSSSSKE  60
ESESESESDS RSGCATQEPN AKPMDNPQKS VPKPNSGVGA KRPAEKEAED GEAKKSKSSK  120
KKPEKKSETT NQGMKRQLLQ KKSDAVDVSK TQLQDKIRKL KKKYENQVAK KKKAFSTPHQ  180
QKTYDLSQKI WGNKVEEVVI ENNGSKKNGE SKSGVKDNGV FDFLVSCGTH VDAMEKLLEK  240
NYEVIGMEKR NEMKRKLTSL KFAEMDLCVK RSKLTHELVS LITDAMKALE N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009623906.14e-45PREDICTED: STOREKEEPER protein-like
RefseqXP_016508976.13e-45PREDICTED: mediator-associated protein 1-like
TrEMBLA0A1S4D6K18e-44A0A1S4D6K1_TOBAC; mediator-associated protein 1-like
STRINGXP_009623906.11e-44(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30421947
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.18e-11DNA-binding storekeeper protein-related transcriptional regulator