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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00689g00121.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
MYB |
Protein Properties |
Length: 380aa MW: 43675.2 Da PI: 6.7174 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00689g00121.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 33.5 | 9.4e-11 | 173 | 210 | 1 | 39 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39
+g WT eEd +l+++v+++G + W+ Ia+++ gR +kq
Peaxi162Scf00689g00121.1 173 KGQWTIEEDRILIHLVEKFGIRKWSQIAQMLK-GRIGKQ 210
799****************************9.**9997 PP
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2 | Myb_DNA-binding | 31.5 | 4.2e-10 | 212 | 239 | 16 | 45 |
HHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 16 vkqlGggtWktIartmgkgRtlkqcksrwq 45
+++ G++ W+ Ia++++ gRt++++k++w+
Peaxi162Scf00689g00121.1 212 HAEVGNK-WAEIAKRLP-GRTENSIKNHWN 239
7889***.*********.***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 380 aa
Download sequence Send
to blast |
MDDDFSINSK NYLQDFEHLD LNFSIPTFNN PDHNFMIETN SYDPFDPFSN IEDDLGDFNF 60 CYERKPFEEN IGASSSIVVN NIHGADEFSI NKENFMDVNM YNEKSFSSVC CEDVKPLNFV 120 VPDESSSCVT ADINGSCKEI GGRKSKKMKR NDNNLSSSMK KPSRGRKKSK SAKGQWTIEE 180 DRILIHLVEK FGIRKWSQIA QMLKGRIGKQ SHAEVGNKWA EIAKRLPGRT ENSIKNHWNA 240 TKRRQFSRRK CRTKWPRPSS LLQNYIKSLN LEKGSSKKNF HDTNPNAKVM KVSTKLEPVD 300 NFCQGNSIEQ VHDYGFSEVQ EFALDDKLFD DIPIGPSNMD DNIEKFMGLE MIPYELSTLV 360 QGEVNKEIDL MEMISRVNKP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC219210 | 3e-71 | AC219210.1 Solanum lycopersicum chromosome 6 clone C06HBa0082B05, complete sequence. |
GenBank | AC232944 | 3e-71 | AC232944.1 Solanum lycopersicum cultivar Heinz 1706 chromosome 6 clone LE_HBa-24A16, complete sequence. |
GenBank | HG975518 | 3e-71 | HG975518.1 Solanum lycopersicum chromosome ch06, complete genome. |