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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00688g00218.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
MIKC_MADS |
Protein Properties |
Length: 202aa MW: 23145 Da PI: 8.431 |
Description |
MIKC_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00688g00218.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 77.3 | 1.1e-24 | 9 | 56 | 1 | 48 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
krien rqvtf+kRr+g+lKKA+ELSvLCdae+ + ifs +gkly+
Peaxi162Scf00688g00218.1 9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYD 56
79********************************************97 PP
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2 | K-box | 56.9 | 8.9e-20 | 83 | 173 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93
+++++ + e++ Lk+eie Lq+ + + G + ++++l eL++Le+ Le + +iRs K+++++++i+ l++ke l+ +nk+
Peaxi162Scf00688g00218.1 83 AKDKQVLDPKDEINMLKNEIEVLQKGLSYMYGGGAGTMTLDELHSLEKYLEIWMYHIRSAKMDIMFQEIQLLKNKEGILKAANKY 167
45666667789************************************************************************** PP
K-box 94 Lrkkle 99
L+ k++
Peaxi162Scf00688g00218.1 168 LQDKID 173
****97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
GO:0048364 | Biological Process | root development |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 202 aa
Download sequence Send
to blast |
MARGKVQMKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGLFIFSA HGKLYDLATK 60 GTMQGLIEKY LKSTRGADVA EEAKDKQVLD PKDEINMLKN EIEVLQKGLS YMYGGGAGTM 120 TLDELHSLEK YLEIWMYHIR SAKMDIMFQE IQLLKNKEGI LKAANKYLQD KIDDQQYTVT 180 NMAPTLTDFQ CPLTIQNEIF QF
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription activator that regulates root development by controlling cell proliferation in root meristem. May mediate responses to auxin in the root. May act as promoter of the flowering transition through up-regulation of SOC, FT and LFY. {ECO:0000269|PubMed:18203871}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By auxin in root phloem. {ECO:0000269|PubMed:18203871}. |