PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00634g00326.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 279aa    MW: 31833.9 Da    PI: 7.3601
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00634g00326.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.7e-09158205455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +h+ +Er RR++iN+++  L++++P +     k +  a +L + ++Y++sLq
  Peaxi162Scf00634g00326.1 158 SHSLAERVRRNKINERLKCLQDIVPGC----YKSMGMAVMLDEIINYVQSLQ 205
                               8*************************8....3569999***********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.17E-10152209No hitNo description
SuperFamilySSF474591.14E-16152222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.656154204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.9E-17154216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-6158205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-9160210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MAYHFIQDMQ NINSPFSVFN TDSILNFHNQ FPEMNLNPTY LEMSNFNFQN LVGYSHENIF  60
TQAPEFSVCV PEKFPRHIQL DDKNTIAHAM PTLPLAATKE INESKKRKTI ETPESSSAYS  120
SPASKGKAKR VKSDENEEEK PPRQVVHVRA KRGQATDSHS LAERVRRNKI NERLKCLQDI  180
VPGCYKSMGM AVMLDEIINY VQSLQNQVEF LSMKLSAAST YHDFNPETDI LETMQRAKAY  240
EAHIMQKLKK EGREAVANSN QVGPVDHSFG CYPHLSYNT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019257970.11e-156PREDICTED: transcription factor BEE 3-like
TrEMBLA0A1J6HUX51e-155A0A1J6HUX5_NICAT; Transcription factor bee 3
STRINGXP_009620411.11e-143(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39712344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.12e-58BR enhanced expression 3