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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00629g00021.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
ERF |
Protein Properties |
Length: 461aa MW: 52299.8 Da PI: 4.4754 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00629g00021.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.1 | 1e-18 | 46 | 95 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr+++ +grWvAeI+d ++ r++lg+f+taeeAa+a+++a+ l+g
Peaxi162Scf00629g00021.1 46 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 95
789******.7*********33....35**********************99887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 461 aa
Download sequence Send
to blast |
MARKRKLAEG QNEKTHGDQP NAARYEMVKG AETAATLNGA QRARKRFVGV RQRPSGRWVA 60 EIKDTIQKIR VWLGTFDTAE EAARAYDEAA CLLRGDNTRT NFWPRSISNL SSTSALPPKI 120 TKLLLSRLKE RNKSLAAAAD SSNFLSLRNV GHQQNQQEEF SNRVVEFSES SYTDYLNDHE 180 DYTIDNNTIT NVSAATSTIQ LVNNYKSSNG DIIEVGYKEE EILGEGNTNI EDIESIDFDF 240 LRKSEEEIDV EIETASQMKG SIAEEIRWDS DEIEEIRMNG KDEIKDKVHT RFTDTGYDNI 300 NTSTSNCPIY NYEDSIGSCY YSPFELAEVL SSMEDGMVYG EETSMVSEDM RRMNYERKFS 360 ASLYAFNGIT ECLKLKMKSG GVLQRERSDQ QLSRLRNACR RSLDEEEGKI EECNIGMTEK 420 KDEDSTRSSL EAVTFSSMES DYDSELSLWS SIDLPPICFV T
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975441 | 5e-52 | HG975441.1 Solanum pennellii chromosome ch02, complete genome. |