PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00592g00445.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bHLH

Protein Properties

Length: 342aa MW: 38649.5 Da PI: 6.8645

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00592g00445.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.9	9.8e-10	157	202	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h + E+ RR + ++f+ Lr+l+P++ K++ a+i A+ YI++L Peaxi162Scf00592g00445.1 157 KHHASEKIRRVHFSDKFQALRSLIPNP-----SKNDRATIIGDAIGYINEL 202 7999********************9.....7*************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.7E-13	152	216	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	12.963	153	202	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.5E-12	157	222	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.75E-8	157	203	No hit	No description
Pfam	PF00010	2.3E-7	157	202	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.7E-4	159	208	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence Send to blast
MGVELQQQHQ QLNLGMGNFH STLNCNIDQE FGHEPNVTGL SYGQLNYQEL DFNPHHQLQN 60 FHNASSLGLL ASTSTTNLFY DPQLMPNMNI CTTQQPTLFK DLFHHGSYGL GTSSLFNHGV 120 VEAELPSGLY HDGSNFEFST GDITSVAKKR EAGKDIKHHA SEKIRRVHFS DKFQALRSLI 180 PNPSKNDRAT IIGDAIGYIN ELKMTVNYLK KQVVEKKERI KRQRTEDGFN IEAENDQLNK 240 LCCNGRSSWL QKKTKNTEVD VRIIDDEVTV KLVQQKRMNC LLFVSKALDE LQLDLHHCSG 300 GLIGDHYSYL FNSKICRGST LYASAVANKV IEVLDQEEHV AI

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence Send to blast

MGVELQQQHQ QLNLGMGNFH STLNCNIDQE FGHEPNVTGL SYGQLNYQEL DFNPHHQLQN  60
FHNASSLGLL ASTSTTNLFY DPQLMPNMNI CTTQQPTLFK DLFHHGSYGL GTSSLFNHGV  120
VEAELPSGLY HDGSNFEFST GDITSVAKKR EAGKDIKHHA SEKIRRVHFS DKFQALRSLI  180
PNPSKNDRAT IIGDAIGYIN ELKMTVNYLK KQVVEKKERI KRQRTEDGFN IEAENDQLNK  240
LCCNGRSSWL QKKTKNTEVD VRIIDDEVTV KLVQQKRMNC LLFVSKALDE LQLDLHHCSG  300
GLIGDHYSYL FNSKICRGST LYASAVANKV IEVLDQEEHV AI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016475213.1	1e-143	PREDICTED: transcription factor bHLH91-like
TrEMBL	A0A1S4AFH0	1e-142	A0A1S4AFH0_TOBAC; transcription factor bHLH91-like
STRING	XP_009788151.1	1e-140	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2696	23	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06170.2	3e-61	bHLH family protein