PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00582g00084.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Dof
Protein Properties Length: 316aa    MW: 35172 Da    PI: 6.2205
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00582g00084.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1177.7e-371570661
                    zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                               +cprC s ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rk+++ 
  Peaxi162Scf00582g00084.1 15 PTCPRCGSINTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRG 70
                              57**************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074788.0E-23760IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.4811569IPR003851Zinc finger, Dof-type
PfamPF027011.6E-311669IPR003851Zinc finger, Dof-type
PROSITE patternPS0136101753IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MERGIIWKPN VELAPTCPRC GSINTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPV  60
GGGCRKSRRG KSSSNIRSST DHGFISRNNL ARGIGLNNNP SIDQSTNSLT QGGDHHHQGP  120
SIDLALVYSN FLNSSKPQPE DHQLQQLELP ELLPNDRQLA VGPSFEFSSL INMEFTSTLG  180
QETQLSEGDA VYFSAIDGIE KHQTTMQHII NHNDHDQYTN MNMNTNINHE LGNYMQLPPL  240
PGEEGVSEGM VWSNPHDHMI FPNDILNTSQ LSVGGLEPAE LPAEPEKAQD PSHHHCVNAD  300
DGSLFSLSNI GNIFRP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00405DAPTransfer from AT3G52440Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009601936.11e-135PREDICTED: cyclic dof factor 5-like
TrEMBLA0A314KSC41e-133A0A314KSC4_NICAT; Dof zinc finger protein dof3.5
STRINGXP_009601936.11e-134(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA129631317
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.15e-36Dof family protein