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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00578g00007.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
MYB |
Protein Properties |
Length: 224aa MW: 25510 Da PI: 8.619 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00578g00007.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 47.8 | 3.4e-15 | 14 | 57 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
+g+WT+eEd ll ++++++G g W+ ++ + g++R++k+c++rw
Peaxi162Scf00578g00007.1 14 KGSWTEEEDILLRKCIEKYGEGKWHQVPVRAGLNRCRKSCRLRW 57
799***************************************** PP
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2 | Myb_DNA-binding | 26 | 2.2e-08 | 56 | 79 | 23 | 47 |
-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47
+W++Ia +++ gRt++++k++w++
Peaxi162Scf00578g00007.1 56 RWSLIAGRLP-GRTANDVKNYWNTN 79
4*********.***********986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 224 aa
Download sequence Send
to blast |
MKTSVFTSSG VLRKGSWTEE EDILLRKCIE KYGEGKWHQV PVRAGLNRCR KSCRLRWSLI 60 AGRLPGRTAN DVKNYWNTNL LTRAKLGPPQ QHDRKCPKAI KTMAKNAIIR PQPWNLSKLA 120 KNNVSTIHKE EHSKQEIIIE KPTTAEVVSR DENVEWWTNL LLDNSNGFEK AATESTSAFQ 180 NIESLLNEEL LSPSINGGTY YPMQETGDMG WSDLSIDADL WELL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HQ428104 | 0.0 | HQ428104.1 Petunia x hybrida cultivar Mitchell AN4 gene, complete sequence. |