PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00574g00056.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family HD-ZIP
Protein Properties Length: 332aa    MW: 37282.3 Da    PI: 4.5943
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00574g00056.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.33e-19101154356
                               --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                  Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                               k++++t+eq++ Le+ Fe ++++  +++ +LAk+lgL+ rq+ +WFqNrRa++k
  Peaxi162Scf00574g00056.1 101 KKRRLTAEQVQFLEKSFEVENKLEPDRKVQLAKELGLQPRQIAIWFQNRRARWK 154
                               56789************************************************9 PP
2HD-ZIP_I/II127.55.7e-41100191192
               HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeve 85 
                               ekkrrl++eqv++LE+sFe e+kLep+rKv+la+eLglqprq+a+WFqnrRAR+ktk lE+dyeaL++++d+lk++ +++ +e+e
  Peaxi162Scf00574g00056.1 100 EKKRRLTAEQVQFLEKSFEVENKLEPDRKVQLAKELGLQPRQIAIWFQNRRARWKTKSLETDYEALRNKFDKLKADYSSVLREKE 184
                               69*********************************************************************************** PP

               HD-ZIP_I/II  86 eLreelk 92 
                               +Lr+e+ 
  Peaxi162Scf00574g00056.1 185 DLRAEVV 191
                               ***9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.24E-1990157IPR009057Homeodomain-like
PROSITE profilePS5007117.62196156IPR001356Homeobox domain
SMARTSM003891.5E-1999160IPR001356Homeobox domain
CDDcd000863.51E-18101157No hitNo description
PfamPF000461.6E-16101154IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.604.5E-20102163IPR009057Homeodomain-like
PRINTSPR000316.6E-6127136IPR000047Helix-turn-helix motif
PROSITE patternPS000270131154IPR017970Homeobox, conserved site
PRINTSPR000316.6E-6136152IPR000047Helix-turn-helix motif
PfamPF021834.0E-13156197IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MAAGRGLFYS DAAGGAGFNG TLFPKQRILS SSSSSSCVTT DAVGSLLVPG CSPPFHASGS  60
MVSFGGVNGG KKSDSTFFQS FDQEENEIDQ DLEEYLHQPE KKRRLTAEQV QFLEKSFEVE  120
NKLEPDRKVQ LAKELGLQPR QIAIWFQNRR ARWKTKSLET DYEALRNKFD KLKADYSSVL  180
REKEDLRAEV VRLTNKLLLE DKEKGELDTS DVKKLSNVSP KENMVVPTLE DEVSKVSASV  240
LKQQDDFNSA KSDVLNSESP YYTDGVQSSI LEQGDSSNVF EHDRSDLSQD EEENFSKNLL  300
AKVEHDHCPM TSSNLSFFEF SVEDQGFGFW SF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009604802.11e-162PREDICTED: homeobox-leucine zipper protein HAT5-like isoform X1
TrEMBLA0A314KNV71e-141A0A314KNV7_NICAT; Homeobox-leucine zipper protein hat5
STRINGXP_009604802.11e-161(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8252495
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.11e-44homeobox 1