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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00553g00531.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
FAR1 |
Protein Properties |
Length: 408aa MW: 47012.8 Da PI: 6.2074 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00553g00531.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 72.5 | 9.2e-23 | 95 | 178 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85
++Yn YA+evGF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a++++++ ++++w++ ++ leH
Peaxi162Scf00553g00531.1 95 NYYNCYAREVGFRVRVKNSWFKRNSKEKYGAVLCCSSQGFKRIKDVN-----RLRKETRTGCPAMMRMRMVDSKRWRILEVTLEH 174
69*****************************************9988.....99******************************* PP
FAR1 86 nHel 89
nH l
Peaxi162Scf00553g00531.1 175 NHLL 178
**87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 408 aa
Download sequence Send
to blast |
MSHLFDSSHF QMEEASVDSD QDVTGQGSGR LQEIESDGLD DKNGEQIESD ELFVQSGGQI 60 ESDVLDDQNG VADGQKEFVA PAVGMEFESY DDAYNYYNCY AREVGFRVRV KNSWFKRNSK 120 EKYGAVLCCS SQGFKRIKDV NRLRKETRTG CPAMMRMRMV DSKRWRILEV TLEHNHLLGT 180 KAYKSIKKTV AGNKKKSDSN SDAEVRTIKL YRALVIDAAW RFMIQRFGVG DHEWLSSLYD 240 ERAKWAPVYL KDTFFAGMAT ARPNETLTSF FDKYVHKQTP LKEFLDKYEL ALQKKHKEEA 300 LADIESRNSN PELKTRCSFE LQLSKAYTGE IFKRFQLEVE EMYSCFSTTQ LHVDGQMVQW 360 FSQLYRSALQ VVEEGVTSLD HYKVALNAFE GSLTRVHQIE EKQNTNSL
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. May have a role in controlling flowering time. {ECO:0000269|PubMed:15591448}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |