PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00499g00414.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 362aa    MW: 39497.7 Da    PI: 5.7847
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00499g00414.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.35.7e-13316358855
                               HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               + ++RRdriN+++  L+el+P +      K +Ka++L +A+eY+ksLq
  Peaxi162Scf00499g00414.1 316 IMQKRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 358
                               679*******************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.085308357IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.76E-14314362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.4E-8314362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.56E-12318362No hitNo description
Gene3DG3DSA:4.10.280.101.4E-15318362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.7E-10318358IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MNNHSVPDFE IDDDYPDIHT SSGVTTSKKS STMGGVEDIM ELIWQDGQVV VQSQNERRHH  60
IIPAAAGEEE TSVTLTGPPV FMQDDEMSSW LQYPLDLDDS SFERDIHLLY TATSTSSVTT  120
AEIRPSPLLP SVGTSVPPLS YQLQNFGHFS RLPRALSHSN NINITTSSSS THTAARASTG  180
VDSNETPKLE SMVSRVSDSV TPVLHGGGRT ATGSTAAAAE TSGATTSGSR SASIEPPPPP  240
AEDRKRKGRE TANAQGHAED VEFESADAKK QASSSTSTKR SRAAEVHNLS ERVCTFQGVG  300
LKLFNQYLNR YLNVSIMQKR RDRINEKMKA LQELIPRCNK SDKASMLDEA IEYLKSLQMQ  360
VQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016488551.11e-99PREDICTED: transcription factor PIF1-like
TrEMBLA0A1S4BI582e-98A0A1S4BI58_TOBAC; transcription factor PIF1-like
STRINGXP_009597633.11e-96(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40592341
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.11e-23phytochrome interacting factor 3-like 5