PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00498g00122.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family GATA
Protein Properties Length: 316aa    MW: 35119.2 Da    PI: 9.9288
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00498g00122.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.31.2e-19168201134
                      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                               Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  Peaxi162Scf00498g00122.1 168 CSDCHTTKTPLWRSGPQGPKSLCNACGIRQRKAR 201
                               *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004012.0E-20162213IPR000679Zinc finger, GATA-type
SuperFamilySSF577164.37E-13164202No hitNo description
PROSITE profilePS5011412.637166198IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.104.3E-16166201IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.14E-13167199No hitNo description
PROSITE patternPS003440168193IPR000679Zinc finger, GATA-type
PfamPF003202.4E-17168201IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MIPTYRNSSS PSFPFELNNE FDHDLNHPLV SPNYQVASSS SYSTCQTFYN STTNQDQIGY  60
YHSEFYQSQH QPEVDKYGSR SGSHGLEKKH GLKITLWKKG NRCENQNDKN PVKNLDRASM  120
EATSTKHTHI KMKLQDQKQH QSISPLETTD HASNSSSNNI NNIPIRVCSD CHTTKTPLWR  180
SGPQGPKSLC NACGIRQRKA RRAMAAAAAA AAANGTNFTT TETSTAMKIK VQQQKQKITK  240
VNTNHVVPFK KRCKFTSAAA GSSSSSSSNN NAQKKLCFED FFINLSNNLA FHRVFPQDEK  300
EAAILLMALS SGLVHG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016488017.11e-117PREDICTED: putative GATA transcription factor 22
TrEMBLA0A1S4BGN51e-116A0A1S4BGN5_TOBAC; putative GATA transcription factor 22
STRINGXP_009604300.15e-94(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30972249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.14e-18GATA family protein