PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00484g00018.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 264aa    MW: 29953.8 Da    PI: 6.2589
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00484g00018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.72.7e-1566112354
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               r+h+e+E+rRRdriN  +++Lr+l+P++     +K++Ka+ L  +ve+Ik+L
  Peaxi162Scf00484g00018.1  66 RNHSEAEKRRRDRINAQLSTLRKLIPSS-----EKMDKAALLGSVVEHIKDL 112
                               78*************************9.....8****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.22863112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-1466121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.04E-1166114No hitNo description
Gene3DG3DSA:4.10.280.103.9E-1666115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.1E-1366112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-1369118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048731.24E-4158224No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MDHSFCSEYW PQEAAAHNAE SLFLVPQIPN SCDVTSFQLH NYPSYFPQWS ESFEVSTEDR  60
TATASRNHSE AEKRRRDRIN AQLSTLRKLI PSSEKMDKAA LLGSVVEHIK DLKERSTEIS  120
KVVSTPTDID EVIIEHINEE EYKGCTRSKK DNMILKASFC CDDRAELFSE LQRAIKNLKL  180
KMMEADITSL GGRIKGVFLV CPSDNAAENV CMNSLKQSLR VVLCRIAISS STSSNRIKSK  240
RQSVKQVNPI EEERNDTVDN LTEF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016564908.11e-125PREDICTED: transcription factor bHLH51
TrEMBLA0A2G3CUE21e-123A0A2G3CUE2_CAPCH; Uncharacterized protein
STRINGPGSC0003DMT4000712931e-105(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA58202235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.11e-36bHLH family protein