PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00475g00064.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | ERF | ||||||||
Protein Properties | Length: 594aa MW: 66348.2 Da PI: 4.3616 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.5 | 2.1e-15 | 109 | 159 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr+++ +g ++AeIr p k +r +lg++ t+e+Aa a+++a+ k++g Peaxi162Scf00475g00064.1 109 RYIGVRRRR-WGTFAAEIRNP---DrKGARLWLGTYETPEDAALAYDEAAFKIRG 159 699***777.**********8...3245*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 22.576 | 109 | 167 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.2E-28 | 109 | 168 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.2E-11 | 109 | 159 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.4E-20 | 109 | 168 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 3.4E-32 | 109 | 173 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.0E-10 | 110 | 121 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 9.03E-23 | 118 | 169 | No hit | No description |
PRINTS | PR00367 | 6.0E-10 | 149 | 169 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 594 aa Download sequence Send to blast |
MNNPADHESF SFSDLNFLES IKQQLLNDSD FSDMFSPTSS SNNALLNSPN SSFGSCLSAT 60 KSFESYILNE NIEETTLTNL DNSLEKSESE EETRDVVARE RNAPQDWRRY IGVRRRRWGT 120 FAAEIRNPDR KGARLWLGTY ETPEDAALAY DEAAFKIRGS KARLNFPHLI GSNMPKPARV 180 TSRRSRVRSP EPASSSSSTS SQNTRTRKSK IDVINSIAKA KWFDITMESE DVFSRKNQEN 240 VIFTKIEPSE AEIASFKLLE FKPYNIDPKI AVDPISDDAT GGNLNPPRAE TGHQSSSNRD 300 NQRLSPEIQL LYGQQKLLQA DMSLEIDPEE IEESNGFNGA FGSDHVRNDE RNKQTPEPLD 360 LQQDHHFQHN FAYQFYGPAE KQPYVSHDQS DIPVGNDGDN LEDVTKDPHG MDHVFEADFD 420 GIDMVDPKEA VVDHQHLFND SGHQSYGLDM RKSTDASEER HKIYHGDGGE FDGVAVVDPK 480 DLVEEHERMI SDATDNVDGI DHINPQGNEE LQHDKDVNSD AVGQQNIEDE GLNIHVPPAD 540 GLDNDIGNVD PINACPDTVV TGAFGKGTLP TEKQNLDVDE GLNIHVAPSD DVFC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 3e-24 | 108 | 167 | 1 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 1e-26 | ethylene-responsive element binding factor 13 |