PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00469g00312.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Trihelix

Protein Properties

Length: 491aa MW: 55167.3 Da PI: 7.1358

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00469g00312.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.1	3.1e-15	89	179	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 +W+++ +++Liea + +l+rg+l++++We+v++++ + ++ r+ +qCk++++ l+k+yk +k++ ++ + + st+p Peaxi162Scf00469g00312.1 89 CWSEEATHTLIEAWGSHYMNLNRGNLRQQHWEQVADAVnrlhgHIKKQYRTDIQCKNRIDTLKKKYKVEKARVSESHGRYISTWP 173 7***********************************8776655555689*****************99999999* PP trihelix 81 yfdqle 86 +f++l+ Peaxi162Scf00469g00312.1 174 FFRSLN 179 *997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	7.0E-25	87	181	No hit	No description
Gene3D	G3DSA:1.10.10.60	9.6E-4	90	153	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence Send to blast
MFRPHNHSDP HSSSNPNSST TYLLCHSTAA AAAASAAAIT MSDDDIPPSP SPSPSPPPNN 60 KLLALPPPPA YTPSPVSVRT PVFPSREDCW SEEATHTLIE AWGSHYMNLN RGNLRQQHWE 120 QVADAVNRLH GHIKKQYRTD IQCKNRIDTL KKKYKVEKAR VSESHGRYIS TWPFFRSLNA 180 LIGSDVKPSP ENITPPLFPP PFVCVPVGLR SKRPMEYAVS PRSFATMAAP VEEDKDEDEE 240 MLSVVGGGSK RKGGGGGMLE GYKRLAEAIG SFSEIYERVE RDKQRQMVEL EKHRMQFMKD 300 LEVHRLKVYM ESQVQLQRLK RVKHNTQAVQ NAESMQVQSS VYIQDEGAFQ DESVQDAVGV 360 KYEGVEDVGV KDGLKINISN LGYLGLYIWE EGGREGKMSI DELQAENRYC TTSERCDREK 420 FKCMRFLQII ADIKIISSTK DAAGEETHPP SKGTIHRVHS SYIDEEVNLT PPSVSVWQCV 480 QHHRAPYPPC I

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence Send to blast

MFRPHNHSDP HSSSNPNSST TYLLCHSTAA AAAASAAAIT MSDDDIPPSP SPSPSPPPNN  60
KLLALPPPPA YTPSPVSVRT PVFPSREDCW SEEATHTLIE AWGSHYMNLN RGNLRQQHWE  120
QVADAVNRLH GHIKKQYRTD IQCKNRIDTL KKKYKVEKAR VSESHGRYIS TWPFFRSLNA  180
LIGSDVKPSP ENITPPLFPP PFVCVPVGLR SKRPMEYAVS PRSFATMAAP VEEDKDEDEE  240
MLSVVGGGSK RKGGGGGMLE GYKRLAEAIG SFSEIYERVE RDKQRQMVEL EKHRMQFMKD  300
LEVHRLKVYM ESQVQLQRLK RVKHNTQAVQ NAESMQVQSS VYIQDEGAFQ DESVQDAVGV  360
KYEGVEDVGV KDGLKINISN LGYLGLYIWE EGGREGKMSI DELQAENRYC TTSERCDREK  420
FKCMRFLQII ADIKIISSTK DAAGEETHPP SKGTIHRVHS SYIDEEVNLT PPSVSVWQCV  480
QHHRAPYPPC I

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006348872.1	1e-112	PREDICTED: trihelix transcription factor ASIL2-like
TrEMBL	M1BTN6	1e-111	M1BTN6_SOLTU; Uncharacterized protein
STRING	PGSC0003DMT400052607	1e-112	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1318	23	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	6e-60	sequence-specific DNA binding transcription factors