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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00463g10017.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
ERF |
Protein Properties |
Length: 329aa MW: 36643.9 Da PI: 4.7944 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00463g10017.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.4 | 3.7e-18 | 32 | 81 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr+++ +grWvAeI+d + ++ r +lg+f taeeAa+a+++a+ l+g
Peaxi162Scf00463g10017.1 32 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDQAACLLRG 81
799******.7*********32...35**********************99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MEINFQKQQQ KEAKKATKLK GRNSRSNGGN NKFVGVRQRP SGRWVAEIKD TTQKIRMWLG 60 TFETAEEAAR AYDQAACLLR GSNTRTNFVT RVSSDSPLAS RIRNLLNSKK NSKQRSHDDK 120 EQSSDSSTSS TDHNIIQNSA TSNNSNNSSP VSTGDSNNSD DSVTSQNIQQ SHHIDQDATQ 180 ADHNMACDQA IVSCNQELLL QESQLFDDAY KPDLSSCSDE LDMGSSSNPY ASNSFSFTNS 240 SVQPEISWNF AQHGYEFAQE LLLDHPRSVV FEGTADDEMG SLTEFERMKV ERSISASLYA 300 VNGVQEYIQT FYDPSESLWD LPPLCSLLC
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AM466283 | 5e-48 | AM466283.1 Vitis vinifera, whole genome shotgun sequence, contig VV78X245563.19, clone ENTAV 115. |
GenBank | FQ396586 | 5e-48 | FQ396586.1 Vitis vinifera clone SS0AEB9YH10. |