PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00441g00317.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bHLH

Protein Properties

Length: 303aa MW: 33322.6 Da PI: 7.0236

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00441g00317.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.5	6.6e-05	170	193	32	55
..TTS-STCHHHHHHHHHHHHHHH CS HLH 32 kapskKlsKaeiLekAveYIksLq 55 +++s++ +Ka +L +++eY+++Lq Peaxi162Scf00441g00317.1 170 HNKSERTNKALMLDEVIEYMRQLQ 193 4599*******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	9.12E-4	162	197	No hit	No description
SuperFamily	SSF47459	1.83E-5	170	206	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	8.9E-6	172	201	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence Send to blast
WLDYEVEELT WENGEQAMHG LGPLHLLNNK PLSNSSPTQY TWDHHKPQVG GTLESIVNQA 60 TGIPHHRPKS PVDGIGGDRG DELMSWFDTY IANTMTRDAL VPSYINTQNS YQRVAPSTHV 120 PSITGTCLVG GSTNVSTCSG AINGKGEVEE EDKEKLSSSS TKRRKAAIKH NKSERTNKAL 180 MLDEVIEYMR QLQAQVQALS NTMMYPIMLP VAVQQQLQMS IMAALTRSNA TATSAVLHPT 240 TSFMPITSGV SPRGPVNVAS TFPVVPNPLS TFQSQPMNMD AYSKMRALYE QYFQPSSNLG 300 PRI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008375804.1	1e-58	transcription factor UNE10 isoform X2
TrEMBL	A0A498JF35	2e-60	A0A498JF35_MALDO; Uncharacterized protein
STRING	XP_008375803.1	8e-56	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15785	2	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	3e-23	bHLH family protein