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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00440g00049.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
bZIP |
Protein Properties |
Length: 373aa MW: 42316 Da PI: 6.4428 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00440g00049.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.9 | 1.5e-10 | 88 | 128 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
k+ rr+++NReAAr+sR+RKka++++Le+ +L + ++L
Peaxi162Scf00440g00049.1 88 KVLRRLAQNREAARKSRLRKKAYVQQLENSKLKLIQLEQEL 128
788*************************9766666655555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MNSSTYTQFV ASRRMGICEP IHQIDMWGDF NGSYPSTSTT MILEVEKCLE DQIPIMEQRL 60 DNETEDTSHG TVGISNRYEP ETSKPIEKVL RRLAQNREAA RKSRLRKKAY VQQLENSKLK 120 LIQLEQELEK ARKQGLYVGG GLDASQLSYS GTASSGTAAF DMEYGHWVEE QNRQTNDLRG 180 ALHSQTSEVE LRTMVDGCLN HYFDLFRMKA TAAKADVLYI MSGMWKTSTE RFFMWIGGFR 240 PSELLKVLTP HLELLTEQQL HEVCNLTQSC QQAEDALSQG MVKLHQILAE AVAAGRLGEG 300 NYSLPQMGPA IEKLEALVRF VNQADHLRQE TLQQMSRILN THQAAQGLLA LGEYFERLRV 360 LSSHWATRLR EPA
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | S73826 | 0.0 | S73826.1 mas-binding factor MBF2=transcription factor TGA1a homolog [Solanum tuberosum=potatoes, root, mRNA, 1477 nt]. |
Publications
? help Back to Top |
- Klinedinst S,Pascuzzi P,Redman J,Desai M,Arias J
A xenobiotic-stress-activated transcription factor and its cognate target genes are preferentially expressed in root tip meristems. Plant Mol. Biol., 2000. 42(5): p. 679-88 [PMID:10809441] - Johnson C,Boden E,Desai M,Pascuzzi P,Arias J
In vivo target promoter-binding activities of a xenobiotic stress-activated TGA factor. Plant J., 2001. 28(2): p. 237-43 [PMID:11722767] - Katagiri F,Seipel K,Chua NH
Identification of a novel dimer stabilization region in a plant bZIP transcription activator. Mol. Cell. Biol., 1992. 12(11): p. 4809-16 [PMID:1406663] - Miao ZH,Lam E
Construction of a trans-dominant inhibitor for members of the TGA family of transcription factors conserved in higher plants. Plant J., 1995. 7(6): p. 887-96 [PMID:7599649] - Pascuzzi P,Hamilton D,Bodily K,Arias J
Auxin-induced stress potentiates trans-activation by a conserved plant basic/leucine-zipper factor. J. Biol. Chem., 1998. 273(41): p. 26631-7 [PMID:9756903]
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