PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00428g01020.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 392aa    MW: 42930.9 Da    PI: 7.4553
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00428g01020.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH361.2e-11320365655
                               HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +++Er RR ri +++ +L++l P+     +k  + a++L +Av+YIk+Lq
  Peaxi162Scf00428g01020.1 320 SIAERVRRTRISERMKKLQDLFPNM----DKQANTADMLDLAVDYIKDLQ 365
                               689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.43314364IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-15317381IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.06E-12318369No hitNo description
Gene3DG3DSA:4.10.280.103.8E-15319381IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.4E-8320365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-12320370IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MFSSTEPIIS REMDKLNSFL FSPSGSFKNC ELAINNEAKE IMGSDYFNQN SQFQQSNNGG  60
LARYRSAPSS FFAGILDGDA NSSGENYVTH DGSSSSDSDT MFTALLNGNN NSNSSNLNDQ  120
KNQLQFASSM KQETAENGFE SCMNYGVGVQ MQSSRSVGLN SNNGNGGGSN LIRQSSSPAG  180
FFNGFDVMGE VGNYRTGANR EASSSANGFN SHISYSSAQS SSSNLMPSIA ENESWNDSSF  240
NSLKRNRDGD LKVFSNNFNA MTTQNGESRN YTSGSGLTHH LSLPKTSSEM AAIEKYLQFQ  300
QDSVPCKIRA KRGFATHPRS IAERVRRTRI SERMKKLQDL FPNMDKQANT ADMLDLAVDY  360
IKDLQKQVQT LNDKKAKCSC PSKQLQYSNG TT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009757642.11e-175PREDICTED: transcription factor bHLH130-like
TrEMBLM1CDA41e-180M1CDA4_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000650290.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44352238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.13e-63bHLH family protein