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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00428g00117.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
MYB |
Protein Properties |
Length: 359aa MW: 39612.8 Da PI: 6.4344 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00428g00117.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 48.4 | 2.1e-15 | 24 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl
Peaxi162Scf00428g00117.1 24 KGLWSPEEDEKLMNYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYL 71
678*******************************************97 PP
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2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 77 | 120 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++++E+el+v+++ lG++ W+ Ia++++ gRt++++k++w++
Peaxi162Scf00428g00117.1 77 RGAFSPQEEELIVHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 120
89********************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MRKPEHGSVM KEKGNNNNKA KLRKGLWSPE EDEKLMNYML TNGQGCWSDI ARNAGLQRCG 60 KSCRLRWINY LRPDLKRGAF SPQEEELIVH LHSILGNRWS QIAARLPGRT DNEIKNFWNS 120 TIKKRLKNNN NNNNNNNSSN NNTPSPNTSD SSSDLRVLMG GSIFPMQGHD VNVMAGLCMD 180 NSSSTTSASS LQAIVPNNHF NPFPQLDSTN YDIIGAAGLY NLPPCLGQFG SSSGHDGGVV 240 DYGVVEAYSS MGLGSDFSVP PLESGNKGTM GENSNIVNFS SNVSAVNDYS LFDKKTNGNN 300 QQLMSDSSDQ SLKVEDYMVG FGNSHHHHWH GESLRIGEFD WEGLLANVSS LPYLDFQVE
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975440 | 3e-80 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. |
GenBank | HG975513 | 3e-80 | HG975513.1 Solanum lycopersicum chromosome ch01, complete genome. |