PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00418g00742.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bHLH

Protein Properties

Length: 317aa MW: 35461.8 Da PI: 7.286

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00418g00742.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.3	0.00032	223	255	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++++ L +l+ + +K + a++L++A+ YI+ Lq Peaxi162Scf00418g00742.1 223 DRISALHRLVAPF-----GKTDSASVLTEAIGYIQFLQ 255 7788888888887.....8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	9.832	205	254	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	8.11E-9	218	267	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	0.00138	219	258	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.1E-6	219	263	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence Send to blast
MDSTNLYQHQ LIQQQLAGYP FLTGISTIQD WNPSMTSEEE YSYYKGKHEL RERSMDTYSS 60 SIKTPILHDG HQINYSNMNC LNDNSFKEQY AFDLNENFLS NEVYMDNSKT CNGFFGGFSA 120 AATSNYISSR EYSNFQDPKF SFNGITYNNG TGDNTSIVGL PELIHCPANK KKPVVSNNIE 180 DSSKAKRLNY NAEITSQEAS KKPRVTLHSS SPVLKVQKEK LGDRISALHR LVAPFGKTDS 240 ASVLTEAIGY IQFLQHQILT LSMPYTKSSH GKLHQINLKD SCIDMKGPPV LDLKSRGLCL 300 VPISLSSYIT TSCDGNI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009624505.1	1e-120	PREDICTED: transcription factor bHLH110-like isoform X2
TrEMBL	A0A1S4BLL7	1e-111	A0A1S4BLL7_TOBAC; transcription factor bHLH110-like
TrEMBL	A0A1U7Y6V8	1e-111	A0A1U7Y6V8_NICSY; transcription factor bHLH110-like
STRING	XP_009624505.1	1e-119	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13443	12	13

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	2e-35	bHLH family protein