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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Peaxi162Scf00411g00039.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
|
| Family |
C2H2 |
| Protein Properties |
Length: 302aa MW: 33909.9 Da PI: 10.1809 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peaxi162Scf00411g00039.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 13.5 | 0.00022 | 89 | 111 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++Cg+ Fs L H+r+H
Peaxi162Scf00411g00039.1 89 HECSICGMEFSLGQALGGHMRRH 111
78********************9 PP
|
| 2 | zf-C2H2 | 11.7 | 0.00081 | 178 | 200 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C+ C+k+F++ L H +H
Peaxi162Scf00411g00039.1 178 FECKTCNKRFPSFQALGGHRASH 200
89**********99999998887 PP
|
| 3 | zf-C2H2 | 13.5 | 0.00022 | 222 | 244 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++Cg+ Fs L H+r+H
Peaxi162Scf00411g00039.1 222 HECSICGMEFSLGQALGGHMRRH 244
78********************9 PP
|
| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| Pfam | PF13912 | 3.1E-10 | 45 | 69 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 5.08E-8 | 45 | 111 | No hit | No description |
| PROSITE profile | PS50157 | 9.432 | 45 | 72 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.14 | 45 | 67 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 47 | 67 | IPR007087 | Zinc finger, C2H2 |
| Gene3D | G3DSA:3.30.160.60 | 5.4E-4 | 86 | 114 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| Pfam | PF13912 | 2.6E-9 | 89 | 114 | IPR007087 | Zinc finger, C2H2 |
| PROSITE profile | PS50157 | 10.699 | 89 | 116 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.067 | 89 | 111 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 91 | 111 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 3.1E-9 | 178 | 244 | No hit | No description |
| Pfam | PF13912 | 9.6E-13 | 178 | 202 | IPR007087 | Zinc finger, C2H2 |
| PROSITE profile | PS50157 | 10.118 | 178 | 205 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.075 | 178 | 200 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 180 | 200 | IPR007087 | Zinc finger, C2H2 |
| PROSITE profile | PS50157 | 9.473 | 222 | 244 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF13912 | 4.3E-9 | 222 | 246 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.067 | 222 | 244 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 224 | 244 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MSSIKRSRSE EYGQVEAEAM ANCLMLLSKL NDHNTSKNQD HHNEFECKTC NKRFPSFQAF 60
GGHRASHKRT KVLAGAGQFL AQVKKNKMHE CSICGMEFSL GQALGGHMRR HRDENNKTLK 120
VARKTTMIPV LKKSNSSKRI FCLDLNLSPD DENVDLNLWP TTPSTSTTTT NQDHHNDFEC 180
KTCNKRFPSF QALGGHRASH KRPKLLVGAG EFLVQPSSKK MHECSICGME FSLGQALGGH 240
MRRHRAAIDE KSKAATKAMM IPVLKKSNSS KRIFCLDLNL TPRNEDVDLK LWPTAPISSP 300
FN
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that may be involved in stress responses. {ECO:0000250}. |
