PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Binding Motif |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00384g00416.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Trihelix

Protein Properties

Length: 380aa MW: 42160.3 Da PI: 9.3134

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00384g00416.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.5	2.2e-15	93	183	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 +W++ +++Liea + +l+rg+l++++W+ev++++ + ++ r+ +qCk++++ l+k+yk +k++ ++ + + +st+p Peaxi162Scf00384g00416.1 93 CWSEAATHTLIEAWGSHYLELKRGNLRQKHWQEVADAVnalhgHTKKQYRTDIQCKNRIDTLKKKYKIEKARVSQSNGRYVSTWP 177 7***********************************999987778889********************999999* PP trihelix 81 yfdqle 86 +f++l+ Peaxi162Scf00384g00416.1 178 HFNSLD 183 **98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	6.3E-26	91	185	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence Send to blast
MYRRPNRTEY FSPSFLSSSS SNPNFSNPIP PPPSSPMSDD DHDATPPSNK NSPSPSPSPP 60 PPCTSNLQLT LPPPPQQPAP TRRQAVFPAR EDCWSEAATH TLIEAWGSHY LELKRGNLRQ 120 KHWQEVADAV NALHGHTKKQ YRTDIQCKNR IDTLKKKYKI EKARVSQSNG RYVSTWPHFN 180 SLDDLIGPNF KLSPSPVTVT VTPRQNTPPM LPPPPSAVPV GPRSKRPAAA AIDHTVSRRN 240 FSAMAAAAAA SASEESDGDE ESETSSPGTM FTGYSRLADA IGRFAEIYER VEHAKQKQMV 300 ELEIQRMQFA KDLELQRMRL IMESQVNFEK LKRAKTSSQA GMSTRTVCNL KKSFGGDTHI 360 SNSVADSIKI CYSEDERGSC

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence Send to blast

MYRRPNRTEY FSPSFLSSSS SNPNFSNPIP PPPSSPMSDD DHDATPPSNK NSPSPSPSPP  60
PPCTSNLQLT LPPPPQQPAP TRRQAVFPAR EDCWSEAATH TLIEAWGSHY LELKRGNLRQ  120
KHWQEVADAV NALHGHTKKQ YRTDIQCKNR IDTLKKKYKI EKARVSQSNG RYVSTWPHFN  180
SLDDLIGPNF KLSPSPVTVT VTPRQNTPPM LPPPPSAVPV GPRSKRPAAA AIDHTVSRRN  240
FSAMAAAAAA SASEESDGDE ESETSSPGTM FTGYSRLADA IGRFAEIYER VEHAKQKQMV  300
ELEIQRMQFA KDLELQRMRL IMESQVNFEK LKRAKTSSQA GMSTRTVCNL KKSFGGDTHI  360
SNSVADSIKI CYSEDERGSC

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00413	DAP	Transfer from AT3G58630	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009760894.1	1e-134	PREDICTED: uncharacterized protein LOC104213156
Refseq	XP_016507452.1	1e-134	PREDICTED: trihelix transcription factor ASIL2-like
TrEMBL	A0A1S4D204	1e-132	A0A1S4D204_TOBAC; trihelix transcription factor ASIL2-like
TrEMBL	A0A1U7VEZ5	1e-132	A0A1U7VEZ5_NICSY; uncharacterized protein LOC104213156
STRING	XP_009760894.1	1e-133	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1318	23	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	7e-46	sequence-specific DNA binding transcription factors