PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00382g00043.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | ERF | ||||||||
Protein Properties | Length: 394aa MW: 43291.4 Da PI: 4.5234 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.9 | 1.4e-19 | 152 | 200 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkl 53 s+y+GVr++k +g+W+AeIrd + + kr++lg++ taeeA +a++ r+++ Peaxi162Scf00382g00043.1 152 SKYRGVRQRK-WGKWAAEIRDpF-----QsKRIWLGTYNTAEEASQAYEMKRLEF 200 89*******9.**********55.....45*******************999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 3.82E-23 | 152 | 193 | No hit | No description |
Pfam | PF00847 | 5.9E-13 | 152 | 201 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.66E-17 | 152 | 200 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 20.192 | 153 | 215 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.8E-19 | 153 | 218 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 7.9E-22 | 153 | 199 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.7E-10 | 154 | 165 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.7E-10 | 176 | 192 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 394 aa Download sequence Send to blast |
MSARLVIFGL CMQQIIYSVS QQSLSQCLSS VSMRLRPIRT CSGVMPEFQK SKKSFETGKA 60 MRKIRIVFND PDATDSSDDE EVIDKKPKRF VREINLPIVG TNDSFSSLKK VLETESSCQD 120 SNNGDKNPKK KRVLAANAKT PKQQLQSKPS SSKYRGVRQR KWGKWAAEIR DPFQSKRIWL 180 GTYNTAEEAS QAYEMKRLEF DALAKSISSN TTNASVSSEK CSNNNKNVGG VCVSEDSAES 240 LVSHTSQSHT SPASVLEMDS LTSGSATVSE VNGKCGQDKA NNVVLDEANV VEQLMGDNMS 300 LAEIGAGMDF DMEMDLFFAG SDDFGQNLDD FAINDFEDLP ICGLEGDVQL PTGLPDFDFD 360 FDFDGYNDSF AYMDETQAQA PLMNGGTPLN IACP |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00217 | DAP | Transfer from AT1G68550 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016548314.1 | 1e-145 | PREDICTED: ethylene-responsive transcription factor ERF118-like | ||||
TrEMBL | A0A2G3B6A9 | 1e-144 | A0A2G3B6A9_CAPCH; Uncharacterized protein | ||||
STRING | Solyc05g009450.1.1 | 1e-133 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2957 | 23 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 9e-34 | ERF family protein |