PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00375g00812.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bHLH

Protein Properties

Length: 321aa MW: 35054.5 Da PI: 5.123

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00375g00812.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.2	4.6e-06	191	228	15	55
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +i s + ++r+ ++ +s++ +Ka++L +++eY+k+L+ Peaxi162Scf00375g00812.1 191 KISSFLTKIRRAAVHN---KSERTNKASMLDEVIEYLKQLE 228 6778888888888888...********************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	2.88E-6	190	241	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.1E-5	203	235	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	7.64E-4	205	232	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence Send to blast
MYQSVPSWDL DDSFPHPNLV NDAPSLDYEV EEITLPNGEL AMLGLSPPGL PNYMPLSNSN 60 YTLDHDYNPQ VSSGTLESIV HQATAIPNHQ LNSAPVDSGG REREDELMFW LNNCLAYTMT 120 RDALVPSPSN TRNFHQRVAP SKYVPSTTST CLAGGSSGAV NGRDIEIACD KMGADNEQVE 180 VGEKDEKKGS KISSFLTKIR RAAVHNKSER TNKASMLDEV IEYLKQLEAQ VQVIRNTMMY 240 SMMLPMTSQQ QLQMSMMSPA MRMAGLMDIN ALTHPNVTAT SSVLHPAFSM HVASSVSPGG 300 HPNAASTVPI VPNPLSTFQS Q

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA25285	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-22	bHLH family protein