PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00350g00091.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 305aa    MW: 34940.2 Da    PI: 7.2047
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00350g00091.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00035221243123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               y C+ C+k+F++   L  H  +H
  Peaxi162Scf00350g00091.1 221 YICETCNKVFRSYQALGGHRASH 243
                               89**********99999998887 PP
2zf-C2H212.10.00061269291123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ++Cp C ++Fs+   L  H r+H
  Peaxi162Scf00350g00091.1 269 HECPVCYRVFSSGQALGGHKRSH 291
                               79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.03221243IPR015880Zinc finger, C2H2-like
SuperFamilySSF576671.8E-8221291No hitNo description
PROSITE profilePS501579.993221248IPR007087Zinc finger, C2H2
PfamPF139126.0E-12221245IPR007087Zinc finger, C2H2
PROSITE patternPS000280223243IPR007087Zinc finger, C2H2
SMARTSM003550.22269291IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.328269291IPR007087Zinc finger, C2H2
PfamPF139129.3E-13269291IPR007087Zinc finger, C2H2
PROSITE patternPS000280271291IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MPKFSPPSLV VENFIHPPHP RLRIDITSTS KDSLVELPPE YLQEQNTDNT QQISEETDSI  60
PSISSSPEDE ENAKKKILNY RIRVNPKKSL RIMDLLQDRE SETESLPYPT QCKRYKRIIN  120
SRISDTHYNQ FLSLERRRQQ QQQQYGKITE FPFVESEPVS SISDTSPDED VANCLMMLSR  180
DKWMTQENEV IDNSASYDED VKTEDSVVVK VTTTRRGRGK YICETCNKVF RSYQALGGHR  240
ASHKKIKVSI NETKNNGNVE SEVQKDKIHE CPVCYRVFSS GQALGGHKRS HGIGVAATNL  300
INIIY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0351320.0AB035132.1 Petunia x hybrida gene for C2H2 zinc-finger protein ZPT2-10, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019244653.13e-66PREDICTED: LOW QUALITY PROTEIN: zinc finger protein ZAT9-like
TrEMBLO220821e-154O22082_PETHY; C2H2 zinc-finger protein ZPT2-10
STRINGPGSC0003DMT4000669394e-62(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10952480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.19e-41C2H2-like zinc finger protein