PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00344g00811.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 631aa    MW: 69732.4 Da    PI: 6.3706
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00344g00811.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.89.7e-33240297260
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                               dDgy+WrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers  d++++ei+Y+g Hnh+k
  Peaxi162Scf00344g00811.1 240 DDGYTWRKYGQKHVKGSEFPRSYYKCTQQNCPVKKKVERSP-DGQITEIVYKGAHNHQK 297
                               8****************************************.***************85 PP
2WRKY33.39.8e-11443464122
                               ---SS-EEEEEEE--TT-SS-E CS
                      WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                               ldDgy+WrKYGqK+vkg+++p 
  Peaxi162Scf00344g00811.1 443 LDDGYRWRKYGQKVVKGNPNPS 464
                               59******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.1E-29233298IPR003657WRKY domain
SuperFamilySSF1182901.28E-25235296IPR003657WRKY domain
SMARTSM007741.7E-36239297IPR003657WRKY domain
PROSITE profilePS5081122.63240298IPR003657WRKY domain
PfamPF031061.3E-25240296IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.4E-12428463IPR003657WRKY domain
SuperFamilySSF1182902.35E-8436464IPR003657WRKY domain
PROSITE profilePS5081115.491438478IPR003657WRKY domain
SMARTSM007748.4E-5443486IPR003657WRKY domain
PfamPF031063.0E-6444464IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 631 aa     Download sequence    Send to blast
MEGNIGEPLN EWNCQVVGNI MDSKTGLDDT QEIAVKVEEN GANEELIIEN FDTNNKGSIA  60
ERRAVKCGFK ASSMSIAEQL RVASTTPAMS PPPARPTFLT IPPGLTPAAL LDSPVMLPNS  120
QFPSIINQEN SMTPYSDHVV NIACPIRTQV DHHHPISFPS SSNTHSQTSR DQFEFPVESP  180
KVTALKNCSS DTPPATNGQE NMTCIGSTNT QLGNISHIRV NQFEQRGAIT PNNITSNSSD  240
DGYTWRKYGQ KHVKGSEFPR SYYKCTQQNC PVKKKVERSP DGQITEIVYK GAHNHQKVQP  300
TRRAMMSSCS YGLGDMSEMN EGIWRNMQLG GNKDGVLERT SSASVLTEVS DQLMSNNHQK  360
NMNVFESAGT TTPEPSSTLA SRDDEDEDRA TEGSTSLGDD ADDCEFEHKR RRREFYSAET  420
SLSSRTAREP RVVVQIESEI DILDDGYRWR KYGQKVVKGN PNPSAATGNQ ASASTSNGQS  480
SMTSPKIHKI SNLGMQVQDF NLQFERKPFD YVRPSFLGSH LNDLRFGTAS SIYDLKFPNL  540
QSPLSYNSFL SRPFTPLQMP DFPLPLSLPI SLPVGHNVPP LGGFHFNNIP LKPSGASSHS  600
TIAVSDQRAH SDNNNRNPRL VKVNEDMKNE N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-162402951571WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR5596783e-75KR559678.1 Nicotiana benthamiana WRKY transcription factor (WRKY79) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009598832.10.0PREDICTED: probable WRKY transcription factor 33 isoform X1
TrEMBLA0A1S4BBY80.0A0A1S4BBY8_TOBAC; probable WRKY transcription factor 33 isoform X1
STRINGXP_009598832.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57672237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.15e-61WRKY DNA-binding protein 2