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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00305g00045.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
MYB |
Protein Properties |
Length: 330aa MW: 37384.9 Da PI: 4.6137 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00305g00045.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 37.7 | 4.6e-12 | 14 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.........TTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.........kgRtlkqcksrwqkyl 48
+g+WT++Ed++l++ + G +W+++++ + R++k+c++rw +yl
Peaxi162Scf00305g00045.1 14 KGPWTADEDKKLINFILSNGQCCWRAVPKLAVilddgigagLLRCGKSCRLRWTNYL 70
79*****************************************************97 PP
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2 | Myb_DNA-binding | 51.1 | 3e-16 | 80 | 120 | 5 | 47 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++ E++ +d+++qlG++ W++Ia++++ gRt++++k++w+++
Peaxi162Scf00305g00045.1 80 SEYEEKMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 120
6779**************.*********.************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MGRQPCCDKV GLKKGPWTAD EDKKLINFIL SNGQCCWRAV PKLAVILDDG IGAGLLRCGK 60 SCRLRWTNYL RPDLKRGLLS EYEEKMVIDL HAQLGNRWSK IASHLPGRTD NEIKNHWNTH 120 IKKKLKKMGI DPVTHKPLST ITNDHPNKQQ PKDLPVIQQE NLQEIIMPPS SVNDVSEMDI 180 ETPIEQSAIS EIKVEEDNNN KNMETTSCKN NINISFDSTT VEVNNNGFCT DEVPLIEPHE 240 ILVPNSESTP STSSSSLSTS SSSSSSILED LKFLPSFDEW PSDYYNMEQN NMGLGWENDF 300 SSTLDFLLND DNDINQFPRD DESWKFDQLL
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that acts as positive regulator of abscisic acid (ABA) signaling in response to salt stress. Acts as negative regulator ABI1, ABI2 and PP2CA, which are protein phosphatases 2C acting as negative regulator of ABA signaling. Binds to the DNA specific sequence and core element 5'-ACGT-3' found in the promoters of ABI1 and PP2CA to negatively regulate their expression during ABA-dependent salt stress response. {ECO:0000269|PubMed:23660402}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by salt stress, drought stress and abscisic acid (ABA). Down-regulated by salicylic acid (SA) methyl jasmonate (JA). {ECO:0000269|PubMed:23660402}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | X99210 | 2e-96 | X99210.1 L.esculentum mRNA for myb-related transcription factor, THM16. |