PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00286g00828.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 475aa    MW: 52751.5 Da    PI: 5.841
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00286g00828.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.3e-09301348455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               ah+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Peaxi162Scf00286g00828.1 301 AHSLAERVRREKISERMKLLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 348
                               8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.32E-11295352No hitNo description
SuperFamilySSF474592.62E-17295367IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-17297365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.682297347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-6301348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-11303353IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MDKGNLFMHD GNTTMSGYGL EMQSNELQHC FFNPNWDNSA TIDQNNDPFE SALSSMVSSP  60
AASNANMPNA STTNSGGDNF VLRELIGRLG SICNSREMSP NSYMHNASTN STNNSCYTTP  120
LNSPPKLNLS MMEHHQMRGN LPNHQLPQFS ADPGFAERAA RLSCFANKTF KSFNESELLQ  180
NSRQLGLNLE PGKLSRVSSN QSIKVLTGSQ LGVQEFTDGT NSAPKNSELG DSRENSSVSE  240
QIPAGEITNS RKRKSSEENN ESDKDSGKAK EEENKDNQKP LPEAPKDYIH VRARRGQATD  300
AHSLAERVRR EKISERMKLL QDLVPGCNKV TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT  360
VNPRMDFNME ALLSKDMFQS RGSLSQNMYP SENSAQAFPY GFQSQPGQNF HKGTEIPFPI  420
NPMNPNLARN ANMQLPSLDG FVEQTPQVPT FFEDDLHSVV QMGFGQNQNQ NNVCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1249254SRKRKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009627868.10.0PREDICTED: transcription factor bHLH62-like
TrEMBLA0A1U7XQA20.0A0A1U7XQA2_NICSY; transcription factor bHLH62-like
STRINGXP_009627868.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10572383
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.12e-81bHLH family protein