PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00286g00531.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bHLH

Protein Properties

Length: 74aa MW: 8704.07 Da PI: 8.8904

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00286g00531.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31	4.6e-10	10	52	9	55
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + RR ri ++ +L++l+P+ +k s a++L +Av++I+ Lq Peaxi162Scf00286g00531.1 10 MQERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIRTLQ 52 578****************7....688***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.512	1	51	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	5.8E-8	9	57	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	3.66E-13	11	67	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.3E-7	11	52	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.48E-7	13	56	No hit	No description
Gene3D	G3DSA:4.10.280.10	4.6E-13	14	70	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 74 aa Download sequence Send to blast
MNIFYFSHLM QERRTRISGK LKKLQDLVPN MDKQTSYADM LDLAVQHIRT LQDEVQNLNK 60 ELENCKCGCK KSSQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009620077.1	8e-37	PREDICTED: transcription factor bHLH128-like isoform X2
Refseq	XP_015169610.1	7e-37	PREDICTED: transcription factor bHLH128-like isoform X2
Swissprot	Q8H102	3e-28	BH128_ARATH; Transcription factor bHLH128
TrEMBL	A0A0V0HVZ0	1e-35	A0A0V0HVZ0_SOLCH; Putative transcription factor bHLH-like
TrEMBL	A0A2G2Y250	5e-36	A0A2G2Y250_CAPAN; Transcription factor
STRING	XP_009620076.1	3e-36	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6455	23	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05805.1	1e-30	bHLH family protein

Publications ? help Back to Top
Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281]