PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00284g00719.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 27798.5 Da PI: 8.6719 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.7 | 2.3e-14 | 64 | 110 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h+e+E+rRRdriN +++Lr+l+P + +K++Ka+ L+ +ve++k+L Peaxi162Scf00284g00719.1 64 RSHSEAEKRRRDRINAQLSTLRKLIPRS-----EKMDKAALLRSVVEHVKEL 110 78************************98.....8****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 16.418 | 61 | 110 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.3E-15 | 64 | 113 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 5.0E-12 | 64 | 110 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.04E-12 | 64 | 111 | No hit | No description |
SuperFamily | SSF47459 | 4.32E-14 | 64 | 121 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.5E-13 | 67 | 116 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd04873 | 5.73E-8 | 150 | 218 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
MDKSSCCEYW PGTETAAHNQ VSPFVLPNSC DVTSFQLYDH PSYFAAPWSQ IEEFSEDRSV 60 SASRSHSEAE KRRRDRINAQ LSTLRKLIPR SEKMDKAALL RSVVEHVKEL KGRAKEISKV 120 LNTPSDIDEV IIEHIVEEED HSNNSIFLKV SLCCDDRPEL FSELNRGLKN LKLTTVEANI 180 SSLGGRIKCT FVLCPSGSFT KENGVRINSL KQSLRVVLGK IATSPSTSNY RIKSKRQRFF 240 LPANYS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 232 | 237 | KSKRQR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009632043.1 | 1e-118 | PREDICTED: transcription factor bHLH51-like | ||||
Refseq | XP_016503104.1 | 1e-118 | PREDICTED: transcription factor bHLH51-like | ||||
TrEMBL | A0A1S4CQ59 | 1e-116 | A0A1S4CQ59_TOBAC; transcription factor bHLH51-like | ||||
STRING | XP_009632043.1 | 1e-117 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5820 | 22 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 2e-43 | bHLH family protein |