PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00273g00613.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 394aa    MW: 43609.1 Da    PI: 7.4728
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00273g00613.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.15.6e-07259299455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                hn+ Er+RRd+iN+++  L++l            +Ka +L +A+eY+++Lq
  Peaxi162Scf00273g00613.1 259 RHNKSERKRRDKINQRMKALQKL-----------TNKALMLDEAIEYMRQLQ 299
                               59*****************9987...........46779************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.87E-13250303No hitNo description
SuperFamilySSF474591.23E-12253311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-9253307IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-4259299IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.1E-8261304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MDDFPPHPNR ALCSHSNPNS FVNDVPSLDY YEVEELTGEN GEQAMHGLGP LHLLNNKPLS  60
NSSPTQYTWD HHKPQVGGTL ESIVNQATGI PHHWPKSPVD DIGGDRGDEL MSWFDTYIAN  120
TMTRDPLVPS YINTQNSHQR VAPSTNVPSI SGTCLVGGST NVSTCTGAIN GRVGEIVWDK  180
MGADNGRVYK KRGHSNIVLS TSKDEPTERF TSTYMVDDHD PVFQSSSQAS IYGEVEEEDK  240
EKQSKVSSSS TKRRKAAIRH NKSERKRRDK INQRMKALQK LTNKALMLDE AIEYMRQLQA  300
QAQAMSNPMM YPMMLPVAVQ QQLQMSMMTP DMRMRMVALT HPNATATSAV LHPTTSFMPI  360
TSGVSPKGPV NVASSFPVVP NPLSTFQSQI LANK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1252267RRKAAIRHNKSERKRR
2263268ERKRRD
3264269RKRRDK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009762879.14e-98PREDICTED: transcription factor UNE10-like
TrEMBLA0A1U7VKK71e-96A0A1U7VKK7_NICSY; transcription factor UNE10-like
STRINGXP_009762879.12e-97(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1578526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.17e-34bHLH family protein