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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00268g00046.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
MYB |
Protein Properties |
Length: 278aa MW: 30870.1 Da PI: 8.6178 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00268g00046.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 30.7 | 7.2e-10 | 14 | 51 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l+++++ +G g + R++k+c++rw +yl
Peaxi162Scf00268g00046.1 14 KGAWTKEEDQRLINYIRAHGEG----------LLRCGKSCRLRWINYL 51
79******************99..........689***********97 PP
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2 | Myb_DNA-binding | 57.3 | 3.6e-18 | 57 | 101 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg++T+eEd+l+++++ +lG++ W+ Ia +++ gRt++++k++w+++
Peaxi162Scf00268g00046.1 57 RGNFTEEEDDLIIKLHSLLGNK-WSVIAGRLP-GRTDNEIKNYWNTH 101
89********************.*********.************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MGRSPCCEKA HTNKGAWTKE EDQRLINYIR AHGEGLLRCG KSCRLRWINY LRPDLKRGNF 60 TEEEDDLIIK LHSLLGNKWS VIAGRLPGRT DNEIKNYWNT HIKRKLISHG IDPQTHRPLN 120 AAANPAATTT ITTNTTKNIC MDFRNNVDQK PHINIINKTN ATDSSNNETK CSSVTTEETQ 180 PLELPKKNTQ VMINLELSIG LPFHAKTDHI YSSNSAESTA PYNFLAAAAA PPPTVAAVPV 240 VAMAELVAET ACLCWQIGFQ GGQSCGKCKT TTGFYRFC
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. {ECO:0000305}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975445 | 6e-38 | HG975445.1 Solanum pennellii chromosome ch06, complete genome. |