PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00244g00076.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 211aa    MW: 24245.4 Da    PI: 9.4297
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00244g00076.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM84.52.1e-2671341128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyW 83 
                               lp+G+rF Ptdeel+ +yLk+ v + +l+  ++ik +d++ +++Pw++   ++++ek  yfFsk ++ ++++ +  r + + g+W
  Peaxi162Scf00244g00076.1   7 LPMGVRFCPTDEELI-NYLKRFVLRGQLPSYDAIKVADLFgELQPWQIF-GANSKEKARYFFSKLKNFKNSKIKFARtVGEIGTW 89 
                               799************.9***********999******987368*****6.677888999******************66679*** PP

                       NAM  84 katgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                               k + +d++++++ +++++g k++L + + ++++ ++ +W+m+ey+l
  Peaxi162Scf00244g00076.1  90 KGQNSDEPIKDHeSNKVIGFKRSLKYQTVKEKD-QRDRWLMKEYAL 134
                               **********9866778*********9666655.9*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.85E-265154IPR003441NAC domain
PROSITE profilePS5100529.1397156IPR003441NAC domain
PfamPF023652.4E-178134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MSSGSKLPMG VRFCPTDEEL INYLKRFVLR GQLPSYDAIK VADLFGELQP WQIFGANSKE  60
KARYFFSKLK NFKNSKIKFA RTVGEIGTWK GQNSDEPIKD HESNKVIGFK RSLKYQTVKE  120
KDQRDRWLMK EYALQKNNSP VENNKDIVVL CKIEDKKAKE KTDNLDKYEV TEGEVDEVIA  180
NLLGNNSHKS MQQPSTSHDQ AGVEQYWNGS A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009604942.13e-59PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A1S4AII01e-57A0A1S4AII0_TOBAC; NAC domain-containing protein 101-like
STRINGXP_009604942.11e-58(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1523178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.11e-13NAC domain containing protein 94