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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00237g00101.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bHLH | ||||||||
Protein Properties | Length: 318aa MW: 36196 Da PI: 8.3518 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.5 | 2.7e-14 | 115 | 166 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i+ A++++k+L+ Peaxi162Scf00237g00101.1 115 QRMTHIAVERNRRRQMNDYLAVLRSLMPPS---YAQRGDQASIVGGAINFVKELE 166 79****************************...*******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.32E-13 | 113 | 170 | No hit | No description |
PROSITE profile | PS50888 | 15.815 | 114 | 165 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 5.63E-17 | 114 | 181 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.8E-13 | 114 | 169 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.4E-11 | 115 | 166 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 8.7E-10 | 120 | 171 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence Send to blast |
MALETVVFQQ DPFTYTYNKD FYNLGGGTNF HDYGFAFDKQ SIVQSPNNGY NWDSCNSSSI 60 AENTYNNNIN SSPEVCTGRL LPVEYAAPVE TSPVSGRRKR RRTKCSKNKE EIENQRMTHI 120 AVERNRRRQM NDYLAVLRSL MPPSYAQRGD QASIVGGAIN FVKELEQLLQ FLEAHKRVKN 180 QLPPNNASHH PFSKFFTFPQ YSTVYNNHQM ATTNYSGAAT EERRSAVADI EVTMVESHAN 240 VKVLSSKRPK QLLKIVNWFQ AMCLTILHLT VTTADHMVLY TFSVKVEDNC QLNTVSEIAT 300 AVHEMVAMIK EEAMCLLR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 97 | 101 | RKRRR |
2 | 97 | 102 | RKRRRT |
3 | 115 | 126 | RMTHIAVERNRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019256976.1 | 1e-156 | PREDICTED: transcription factor bHLH96-like | ||||
Swissprot | Q9C7T4 | 2e-83 | BH096_ARATH; Transcription factor bHLH96 | ||||
TrEMBL | A0A1J6HUB1 | 1e-155 | A0A1J6HUB1_NICAT; Transcription factor bhlh96 | ||||
STRING | XP_009625368.1 | 1e-155 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1996 | 24 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 7e-86 | bHLH family protein |
Publications ? help Back to Top | |||
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