PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00224g00514.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

NAC

Protein Properties

Length: 314aa MW: 36231.3 Da PI: 10.3735

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00224g00514.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	94	2.3e-29	5	78	53	127
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 ++++ew+fFs+r +ky++g++++rat+sgyWkatgk+++v+s +++ +g+k+tLvf++grapkg++t+W+mhey Peaxi162Scf00224g00514.1 5 ESDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERNVKS-GSNMIGTKRTLVFHTGRAPKGQRTQWIMHEYC 78 5689************************************.99***************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	36.125	1	97	IPR003441	NAC domain
SuperFamily	SSF101941	8.37E-34	5	96	IPR003441	NAC domain
Pfam	PF02365	3.4E-14	9	77	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence Send to blast
KSIVESDNEW FFFSPRGRKY PNGSQSKRAT ESGYWKATGK ERNVKSGSNM IGTKRTLVFH 60 TGRAPKGQRT QWIMHEYCKT GNSYVEDSMV VCRLRKNNEF HLNDTPGSRR NHPATTETKE 120 GISSFSSHLV EKIESESGSE SDKLTKELSH HHSSSFWKDF DEEDCFADIM KDDIIKLDDS 180 SYKARNNNLL PIITRKLESP TTSSTWEAQN VMSHRLPFQG TANRRLRLQK ERAPRRVERS 240 EAVEANKKKN HAVSISRRFI DIKPVKMMKH WLIPLFLVSL MLLVIFLCLF GVPQQVKWLR 300 HLVITPAEVN IKPA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3swm_A	2e-25	6	96	72	167	NAC domain-containing protein 19
3swm_B	2e-25	6	96	72	167	NAC domain-containing protein 19
3swm_C	2e-25	6	96	72	167	NAC domain-containing protein 19
3swm_D	2e-25	6	96	72	167	NAC domain-containing protein 19
3swp_A	2e-25	6	96	72	167	NAC domain-containing protein 19
3swp_B	2e-25	6	96	72	167	NAC domain-containing protein 19
3swp_C	2e-25	6	96	72	167	NAC domain-containing protein 19
3swp_D	2e-25	6	96	72	167	NAC domain-containing protein 19
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009787917.1	1e-164	PREDICTED: NAC domain-containing protein 89-like
TrEMBL	A0A1U7X741	1e-163	A0A1U7X741_NICSY; NAC domain-containing protein 89-like
STRING	XP_009787917.1	1e-164	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4154	22	43

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22290.1	1e-51	NAC domain containing protein 89