PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00216g00001.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 309aa    MW: 34918.7 Da    PI: 6.5169
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00216g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.72.3e-14131178355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               + h  +E++RR+r+ ++f +L  l+P++     kKl+Ka+iL  A++YIk+L+
  Peaxi162Scf00216g00001.1 131 QDHVLAEKKRRERLTQSFITLSALIPNL-----KKLDKASILGDAIKYIKQLE 178
                               56999***********************.....9*****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.897128177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.3E-12131178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-17132193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.13E-14133182No hitNo description
SuperFamilySSF474593.79E-17133194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.0E-16134183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MDISSWSEME INMNMNDLHY VDHFQAMMGP FDELPFNNNS FSSCTYGIQS SQVAGFLEEK  60
PAFFSSKKET HQNFFENSLT SVKTEVLPSG ATINFSSSAI SMDSDFEAIG FGIGDFSHEK  120
KSNSRTHLQA QDHVLAEKKR RERLTQSFIT LSALIPNLKK LDKASILGDA IKYIKQLEEQ  180
VRTLEEQANK CDEEPVAAVK RARILSSYED SSSFDENSNK STEKSVPEIE VRVSGGNILI  240
RMYCKKQAKI LKEIFSQVEK FHLTIISSSV IPFGYITTHI TIIAKMEHQS SMKPENAVHK  300
IREAILKLI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006357745.11e-132PREDICTED: transcription factor bHLH18-like
TrEMBLA0A1S4D2P91e-121A0A1S4D2P9_TOBAC; transcription factor bHLH18-like
STRINGXP_009605673.11e-122(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45081443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-43bHLH family protein