PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00213g00939.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Trihelix
Protein Properties Length: 310aa    MW: 35585.2 Da    PI: 7.3739
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00213g00939.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.54.5e-101887271
                  trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71
                              Wt +e+l+L++  ++++ + +++ +  ++W++   ++ + g++rs +qCk++we +   y k+k  ekk 
  Peaxi162Scf00213g00939.1 18 WTLDETLTLVNEMNSTQVECGNKLSSFQKWQSTVHQCNSLGVNRSLNQCKKRWEFIIENYNKVKPYEKKY 87
                              ****************************************************************999885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.8E-91686No hitNo description
PROSITE profilePS500906.2841874IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MDGTSGSLRT RSQAAPDWTL DETLTLVNEM NSTQVECGNK LSSFQKWQST VHQCNSLGVN  60
RSLNQCKKRW EFIIENYNKV KPYEKKYWKS SFSEIKKREL GLPENFELEL FRAIDGYFKG  120
LQGEDGGKGA DTDPDSDPEA QPLRPKRQRR RTKPQRYRME ERLNPWRRIL NENRMYEQSK  180
MGIKHEASID AKLEAPRLEK PRIEIKHETS SPEEKVELPN LSMVGEVNAE QVNVDNPEDM  240
MAATLRENAE LITAIVEGNS MNNRDCRLAD LKNLEAGRVQ LIRSQGSQLI DCLGKISDTL  300
GQLCDSIHKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019226701.11e-175PREDICTED: trihelix transcription factor ASR3
TrEMBLA0A314KRR81e-174A0A314KRR8_NICAT; Uncharacterized protein
STRINGXP_009780883.11e-172(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA83602124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.14e-42sequence-specific DNA binding transcription factors