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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00204g00217.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
bZIP |
Protein Properties |
Length: 373aa MW: 41649.3 Da PI: 5.8611 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00204g00217.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 35.5 | 2.2e-11 | 86 | 127 | 2 | 42 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHH CS
bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLee.kvkeLeaeN 42
+ +k+ rr+++NReAAr+sR+RKka++++Le+ k k L+ e
Peaxi162Scf00204g00217.1 86 PTDKVRRRLAQNREAARKSRLRKKAYVQQLENsKLKLLQLEQ 127
5799***************************73455554444 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MNSSTYTQFV ASKRMGLCDP IHQIGMWGDF KGSSFPNSSA TLILEVENCL ENEMPIMEKL 60 LGNEIEEPSH GTVGTSNRYE PQTSKPTDKV RRRLAQNREA ARKSRLRKKA YVQQLENSKL 120 KLLQLEQELE RAKQQGMYVG GGLDASQIDY SGTANSGIAA FEMEYGHWVE EQNKQTDDLR 180 SALHSQIGEI ELRILVEGCL SHYFDLFRMK ATAANADVLY LMSGTWKTSA ERFFFWIGGF 240 RPSELLKVLL PHLEPLTEQQ VGEVCNLTQS CQQAEDALSQ GMVKLHQILS EAVAAGTLGD 300 GSILPQMTAT IEKLEALVRF VNQADHLRQE TLLQMSCILT THQSAQGLLA LGEYFKRLRA 360 LSSLWANGPS ESA
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | X82544 | 0.0 | X82544.1 S.tuberosum mRNA for leucine zipper transcription factor. |
Publications
? help Back to Top |
- Klinedinst S,Pascuzzi P,Redman J,Desai M,Arias J
A xenobiotic-stress-activated transcription factor and its cognate target genes are preferentially expressed in root tip meristems. Plant Mol. Biol., 2000. 42(5): p. 679-88 [PMID:10809441] - Johnson C,Boden E,Desai M,Pascuzzi P,Arias J
In vivo target promoter-binding activities of a xenobiotic stress-activated TGA factor. Plant J., 2001. 28(2): p. 237-43 [PMID:11722767] - Katagiri F,Seipel K,Chua NH
Identification of a novel dimer stabilization region in a plant bZIP transcription activator. Mol. Cell. Biol., 1992. 12(11): p. 4809-16 [PMID:1406663] - Miao ZH,Lam E
Construction of a trans-dominant inhibitor for members of the TGA family of transcription factors conserved in higher plants. Plant J., 1995. 7(6): p. 887-96 [PMID:7599649] - Pascuzzi P,Hamilton D,Bodily K,Arias J
Auxin-induced stress potentiates trans-activation by a conserved plant basic/leucine-zipper factor. J. Biol. Chem., 1998. 273(41): p. 26631-7 [PMID:9756903]
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